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Publications 2019

Lambo, S. (First author) ; Gröbner, S. ; Rausch, T. ; et al
The molecular landscape of ETMR at diagnosis and relapse.
Nature <London> 576(7786), 274-280 (2019) [10.1038/s41586-019-1815-x]2019 BibTeX | EndNote: XML, Text | RIS

Jones, D. (First author) ; Bandopadhayay, P. ; Jabado, N.
The Power of Human Cancer Genetics as Revealed by Low-Grade Gliomas.
Annual review of genetics 53(1), 483 - 503 (2019) [10.1146/annurev-genet-120417-031642]2019 BibTeX | EndNote: XML, Text | RIS

Aldape, K. ; Brindle, K. M. ; Chesler, L. ; Chopra, R. ; Gajjar, A. ; Gilbert, M. R. ; Gottardo, N. ; Gutmann, D. H. ; Hargrave, D. ; Holland, E. C. ; Jones, D. T. W. ; Joyce, J. A. ; Kearns, P. ; Kieran, M. W. ; Mellinghoff, I. K. ; Merchant, M. ; Pfister, S. M. ; Pollard, S. M. ; Ramaswamy, V. ; Rich, J. N. ; Robinson, G. W. ; Rowitch, D. H. ; Sampson, J. H. ; Taylor, M. D. ; Workman, P. ; Gilbertson, R. J.
Challenges to curing primary brain tumours.
Nature reviews / Clinical oncology Clinical oncology [...] 16(8), 509 - 520 (2019) [10.1038/s41571-019-0177-5]2019 pmc Fulltext by Pubmed Central BibTeX | EndNote: XML, Text | RIS

Reinhardt, A. (First author) ; Stichel, D. ; Schrimpf, D. ; Koelsche, C. ; Wefers, A. K. ; Ebrahimi, A. ; Sievers, P. ; Huang, K. ; Casalini, M. B. ; Fernández-Klett, F. ; Suwala, A. ; Weller, M. ; Gramatzki, D. ; Felsberg, J. ; Reifenberger, G. ; Becker, A. ; Hans, V. H. ; Prinz, M. ; Staszewski, O. ; Acker, T. ; Dohmen, H. ; Hartmann, C. ; Paulus, W. ; Heß, K. ; Brokinkel, B. ; Schittenhelm, J. ; Buslei, R. ; Deckert, M. ; Mawrin, C. ; Hewer, E. ; Pohl, U. ; Jaunmuktane, Z. ; Brandner, S. ; Unterberg, A. ; Hänggi, D. ; Platten, M. ; Pfister, S. M. ; Wick, W. ; Herold-Mende, C. ; Korshunov, A. ; Reuss, D. E. ; Sahm, F. ; Jones, D. T. W. ; Capper, D. ; von Deimling, A. (Last author)
Tumors diagnosed as cerebellar glioblastoma comprise distinct molecular entities.
Acta Neuropathologica Communications 7(1), 163 (2019) [10.1186/s40478-019-0801-8]2019 DBCoverage Fulltext by Pubmed Central BibTeX | EndNote: XML, Text | RIS

Jour, G. ; Serrano, J. ; Koelsche, C. ; Jones, D. T. W. ; von Deimling, A. ; Allen, J. ; Snuderl, M.
Primary CNS Alveolar Rhabdomyosarcoma: Importance of Epigenetic and Transcriptomic Assays for Accurate Diagnosis.
Journal of neuropathology and experimental neurology 78(11), 1073 - 1075 (2019) [10.1093/jnen/nlz083]2019 BibTeX | EndNote: XML, Text | RIS

Pajtler, K. (First author) ; Wei, Y. ; Okonechnikov, K. (First author) ; Silva, P. B. G. (First author) ; Vouri, M. ; Zhang, L. ; Brabetz, S. ; Sieber, L. ; Gulley, M. ; Mauermann, M. ; Wedig, T. ; Mack, N. ; Imamura Kawasawa, Y. ; Sharma, T. ; Zuckermann, M. ; Andreiuolo, F. ; Holland, E. ; Maass, K. ; Körkel-Qu, H. ; Liu, H.-K. ; Sahm, F. ; Capper, D. ; Bunt, J. ; Richards, L. J. ; Jones, D. T. W. ; Korshunov, A. ; Chavez, L. ; Lichter, P. ; Hoshino, M. ; Pfister, S. ; Kool, M. ; Li, W. ; Kawauchi, D. (Last author)
YAP1 subgroup supratentorial ependymoma requires TEAD and nuclear factor I-mediated transcriptional programmes for tumorigenesis.
Nature Communications 10(1), 3914 (2019) [10.1038/s41467-019-11884-5]2019 DBCoverage Fulltext by Pubmed Central BibTeX | EndNote: XML, Text | RIS

Ghasemi, D. R. (First author) ; Sill, M. ; Okonechnikov, K. ; Korshunov, A. ; Yip, S. ; Schutz, P. W. ; Scheie, D. ; Kruse, A. ; Harter, P. N. ; Kastelan, M. ; Wagner, M. ; Hartmann, C. ; Benzel, J. ; Maass, K. K. ; Khasraw, M. ; Sträter, R. ; Thomas, C. ; Paulus, W. ; Kratz, C. P. ; Witt, H. ; Kawauchi, D. ; Herold-Mende, C. ; Sahm, F. ; Brandner, S. ; Kool, M. ; Jones, D. T. W. ; von Deimling, A. ; Pfister, S. M. ; Reuss, D. E. (Last author) ; Pajtler, K. (Last author)
MYCN amplification drives an aggressive form of spinal ependymoma.
Acta neuropathologica 138(6), 1075-1089 (2019) [10.1007/s00401-019-02056-2]2019 BibTeX | EndNote: XML, Text | RIS

Jones, D. (First author) ; Banito, A. ; Grünewald, T. G. P. ; Haber, M. ; Jäger, N. ; Kool, M. ; Milde, T. ; Molenaar, J. J. ; Nabbi, A. ; Pugh, T. J. ; Schleiermacher, G. ; Smith, M. A. ; Westermann, F. ; Pfister, S. (Last author)
Molecular characteristics and therapeutic vulnerabilities across paediatric solid tumours.
Nature reviews / Cancer Cancer [...] 19(8), 420 - 438 (2019) [10.1038/s41568-019-0169-x]2019 BibTeX | EndNote: XML, Text | RIS

Stichel, D. (First author) ; Schrimpf, D. ; Casalini, B. ; Meyer, J. ; Wefers, A. K. ; Sievers, P. ; Korshunov, A. ; Koelsche, C. ; Reuss, D. E. ; Reinhardt, A. ; Ebrahimi, A. ; Fernández-Klett, F. ; Kessler, T. ; Sturm, D. ; Ecker, J. ; Milde, T. ; Herold-Mende, C. ; Witt, O. ; Pfister, S. M. ; Wick, W. ; Jones, D. T. W. ; von Deimling, A. (Last author) ; Sahm, F. (Last author)
Routine RNA sequencing of formalin-fixed paraffin-embedded specimens in neuropathology diagnostics identifies diagnostically and therapeutically relevant gene fusions.
Acta neuropathologica 138(5), 827-835 (2019) [10.1007/s00401-019-02039-3]2019 BibTeX | EndNote: XML, Text | RIS

Sievers, P. (First author) ; Appay, R. ; Schrimpf, D. ; Stichel, D. ; Reuss, D. E. ; Wefers, A. K. ; Reinhardt, A. ; Coras, R. ; Ruf, V. C. ; Schmid, S. ; de Stricker, K. ; Boldt, H. B. ; Kristensen, B. W. ; Petersen, J. K. ; Ulhøi, B. P. ; Gardberg, M. ; Aronica, E. ; Hasselblatt, M. ; Brück, W. ; Bielle, F. ; Mokhtari, K. ; Lhermitte, B. ; Wick, W. ; Herold-Mende, C. ; Hänggi, D. ; Brandner, S. ; Giangaspero, F. ; Capper, D. ; Rushing, E. ; Wesseling, P. ; Pfister, S. M. ; Figarella-Branger, D. ; von Deimling, A. ; Sahm, F. ; Jones, D. (Last author)
Rosette-forming glioneuronal tumors share a distinct DNA methylation profile and mutations in FGFR1, with recurrent co-mutation of PIK3CA and NF1.
Acta neuropathologica 138(3), 497-504 (2019) [10.1007/s00401-019-02038-4]2019 BibTeX | EndNote: XML, Text | RIS

Feuerbach, L. (First author) ; Sieverling, L. ; Deeg, K. I. ; Ginsbach, P. ; Hutter, B. ; Buchhalter, I. ; Northcott, P. A. ; Mughal, S. S. ; Chudasama, P. ; Glimm, H. ; Scholl, C. ; Lichter, P. ; Fröhling, S. ; Pfister, S. M. ; Jones, D. T. W. ; Rippe, K. ; Brors, B. (Last author)
TelomereHunter - in silico estimation of telomere content and composition from cancer genomes.
BMC bioinformatics 20(1), 272 (2019) [10.1186/s12859-019-2851-0]2019 DBCoverage BibTeX | EndNote: XML, Text | RIS

Fangusaro, J. ; Onar-Thomas, A. ; Young Poussaint, T. ; Wu, S. ; Ligon, A. H. ; Lindeman, N. ; Banerjee, A. ; Packer, R. J. ; Kilburn, L. B. ; Goldman, S. ; Pollack, I. F. ; Qaddoumi, I. ; Jakacki, R. I. ; Fisher, P. G. ; Dhall, G. ; Baxter, P. ; Kreissman, S. G. ; Stewart, C. F. ; Jones, D. T. W. ; Pfister, S. M. ; Vezina, G. ; Stern, J. S. ; Panigrahy, A. ; Patay, Z. ; Tamrazi, B. ; Jones, J. Y. ; Haque, S. S. ; Enterline, D. S. ; Cha, S. ; Fisher, M. J. ; Doyle, L. A. ; Smith, M. ; Dunkel, I. J. ; Fouladi, M.
Selumetinib in paediatric patients with BRAF-aberrant or neurofibromatosis type 1-associated recurrent, refractory, or progressive low-grade glioma: a multicentre, phase 2 trial.
The lancet <London> / Oncology Oncology 20(7), 1011-1022 (2019) [10.1016/S1470-2045(19)30277-3]2019 BibTeX | EndNote: XML, Text | RIS

Schramm, K. (First author) ; Iskar, M. ; Statz, B. ; Jäger, N. ; Haag, D. ; S?abicki, M. ; Pfister, S. M. ; Zapatka, M. ; Gronych, J. ; Jones, D. T. W. (Last author) ; Lichter, P. (Last author)
DECIPHER pooled shRNA library screen identifies PP2A and FGFR signaling as potential therapeutic targets for DIPGs.
Neuro-Oncology 21(7), 867-877 (2019) [10.1093/neuonc/noz057]2019 BibTeX | EndNote: XML, Text | RIS

Pfaff, E. (First author) ; El Damaty, A. ; Balasubramanian, G. P. ; Blattner-Johnson, M. ; Worst, B. C. ; Stark, S. ; Witt, H. ; Pajtler, K. W. ; van Tilburg, C. M. ; Witt, R. ; Milde, T. ; Jakobs, M. ; Fiesel, P. ; Frühwald, M. C. ; Hernáiz Driever, P. ; Thomale, U. W. ; Schuhmann, M. U. ; Metzler, M. ; Bochennek, K. ; Simon, T. ; Dürken, M. ; Karremann, M. ; Knirsch, S. ; Ebinger, M. ; von Bueren, A. O. ; Pietsch, T. ; Herold-Mende, C. ; Reuss, D. E. ; Kiening, K. ; Lichter, P. ; Eggert, A. ; Kramm, C. M. ; Pfister, S. M. ; Jones, D. T. W. ; Bächli, H. ; Witt, O. (Last author)
Brainstem biopsy in pediatric diffuse intrinsic pontine glioma in the era of precision medicine: the INFORM study experience.
European journal of cancer 114, 27 - 35 (2019) [10.1016/j.ejca.2019.03.019]2019 BibTeX | EndNote: XML, Text | RIS

Binder, H. ; Willscher, E. ; Loeffler-Wirth, H. ; Hopp, L. ; Jones, D. T. W. ; Pfister, S. M. ; Kreuz, M. ; Gramatzki, D. ; Fortenbacher, E. ; Hentschel, B. ; Tatagiba, M. ; Herrlinger, U. ; Vatter, H. ; Matschke, J. ; Westphal, M. ; Krex, D. ; Schackert, G. ; Tonn, J. C. ; Schlegel, U. ; Steiger, H.-J. ; Wick, W. ; Weber, R. G. ; Weller, M. ; Loeffler, M.
DNA methylation, transcriptome and genetic copy number signatures of diffuse cerebral WHO grade II/III gliomas resolve cancer heterogeneity and development.
Acta Neuropathologica Communications 7(1), 59 (2019) [10.1186/s40478-019-0704-8]2019 DBCoverage Fulltext by Pubmed Central BibTeX | EndNote: XML, Text | RIS

Korshunov, A. (First author) ; Okonechnikov, K. ; Sahm, F. ; Ryzhova, M. ; Stichel, D. ; Sievers, P. ; Meyer, J. ; Schrimpf, D. ; Zheludkova, O. ; Golanov, A. ; Lichter, P. ; Jones, D. T. W. ; Pfister, S. M. ; von Deimling, A. ; Kool, M. (Last author)
Molecular progression of SHH-activated medulloblastomas.
Acta neuropathologica 138(2), 327-330 (2019) [10.1007/s00401-019-02022-y]2019 BibTeX | EndNote: XML, Text | RIS

Paramasivam, N. (First author) ; Hübschmann, D. (First author) ; Toprak, U. H. ; Ishaque, N. ; Neidert, M. ; Schrimpf, D. ; Stichel, D. ; Reuss, D. ; Sievers, P. ; Reinhardt, A. ; Wefers, A. K. ; Jones, D. T. W. ; Gu, Z. ; Werner, J. ; Uhrig, S. ; Wirsching, H.-G. ; Schick, M. ; Bewerunge-Hudler, M. ; Beck, K. ; Brehmer, S. ; Urbschat, S. ; Seiz-Rosenhagen, M. ; Hänggi, D. ; Herold-Mende, C. ; Ketter, R. ; Eils, R. ; Ram, Z. ; Pfister, S. M. ; Wick, W. ; Weller, M. ; Grossmann, R. ; von Deimling, A. ; Schlesner, M. (Last author) ; Sahm, F. (Last author)
Mutational patterns and regulatory networks in epigenetic subgroups of meningioma.
Acta neuropathologica 138(2), 295-308 (2019) [10.1007/s00401-019-02008-w]2019 BibTeX | EndNote: XML, Text | RIS

Hou, Y. ; Pinheiro, J. ; Sahm, F. ; Reuss, D. E. ; Schrimpf, D. ; Stichel, D. ; Casalini, B. ; Koelsche, C. ; Sievers, P. ; Wefers, A. K. ; Reinhardt, A. ; Ebrahimi, A. ; Fernández-Klett, F. ; Pusch, S. ; Meier, J. ; Schweizer, L. ; Paulus, W. ; Prinz, M. ; Hartmann, C. ; Plate, K. H. ; Reifenberger, G. ; Pietsch, T. ; Varlet, P. ; Pagès, M. ; Schüller, U. ; Scheie, D. ; de Stricker, K. ; Frank, S. ; Hench, J. ; Pollo, B. ; Brandner, S. ; Unterberg, A. ; Pfister, S. M. ; Jones, D. T. W. ; Korshunov, A. ; Wick, W. ; Capper, D. ; Blümcke, I. ; von Deimling, A. (Last author) ; Bertero, L.
Papillary glioneuronal tumor (PGNT) exhibits a characteristic methylation profile and fusions involving PRKCA.
Acta neuropathologica 137(5), 837 - 846 (2019) [10.1007/s00401-019-01969-2]2019 BibTeX | EndNote: XML, Text | RIS

Korshunov, A. (First author) ; Sahm, F. ; Okonechnikov, K. ; Ryzhova, M. ; Stichel, D. ; Schrimpf, D. ; Casalini, B. ; Sievers, P. ; Meyer, J. ; Zheludkova, O. ; Golanov, A. ; Lichter, P. ; Jones, D. ; Pfister, S. ; Kool, M. ; von Deimling, A. (Last author)
Desmoplastic/nodular medulloblastomas (DNMB) and medulloblastomas with extensive nodularity (MBEN) disclose similar epigenetic signatures but different transcriptional profiles.
Acta neuropathologica 137(6), 1003-1015 (2019) [10.1007/s00401-019-01981-6]2019 BibTeX | EndNote: XML, Text | RIS

Koelsche, C. ; Kriegsmann, M. ; Kommoss, F. K. F. ; Stichel, D. ; Kriegsmann, K. ; Vokuhl, C. ; Grünewald, T. G. P. ; Romero-Pérez, L. ; Kirchner, T. ; de Alava, E. ; Diaz-Martin, J. ; Hartmann, W. ; Baumhoer, D. ; Antonescu, C. R. ; Szuhai, K. ; Flucke, U. ; Dirksen, U. ; Pfister, S. ; Jones, D. ; Mechtersheimer, G. ; von Deimling, A. (Last author)
DNA methylation profiling distinguishes Ewing-like sarcoma with EWSR1-NFATc2 fusion from Ewing sarcoma.
Journal of cancer research and clinical oncology 145(5), 1273-1281 (2019) [10.1007/s00432-019-02895-2]2019 BibTeX | EndNote: XML, Text | RIS

Körber, V. (First author) ; Yang, J. ; Barah, P. ; Wu, Y. ; Stichel, D. ; Gu, Z. ; Fletcher, M. ; Jones, D. ; Hentschel, B. ; Lamszus, K. ; Tonn, J. C. ; Schackert, G. ; Sabel, M. ; Felsberg, J. ; Zacher, A. ; Kaulich, K. ; Hübschmann, D. ; Herold-Mende, C. ; von Deimling, A. ; Weller, M. ; Radlwimmer, B. ; Schlesner, M. ; Reifenberger, G. ; Höfer, T. ; Lichter, P. (Last author)
Evolutionary Trajectories of IDHWT Glioblastomas Reveal a Common Path of Early Tumorigenesis Instigated Years ahead of Initial Diagnosis.
Cancer cell 35(4), 692-704 (2019) [10.1016/j.ccell.2019.02.007]2019 BibTeX | EndNote: XML, Text | RIS

Ellison, D. W. ; Hawkins, C. ; Jones, D. ; Onar-Thomas, A. ; Pfister, S. ; Reifenberger, G. ; Louis, D. N.
cIMPACT-NOW update 4: diffuse gliomas characterized by MYB, MYBL1, or FGFR1 alterations or BRAFV600E mutation
Acta neuropathologica 137(4), 683 - 687 (2019) [10.1007/s00401-019-01987-0]2019 BibTeX | EndNote: XML, Text | RIS

Cruzeiro, G. A. V. ; Salomão, K. B. ; de Biagi, C. A. O. ; Baumgartner, M. ; Sturm, D. ; Lira, R. C. P. ; de Almeida Magalhães, T. ; Baroni Milan, M. ; da Silva Silveira, V. ; Saggioro, F. P. ; de Oliveira, R. S. ; Dos Santos Klinger, P. H. ; Seidinger, A. L. ; Yunes, J. A. ; de Paula Queiroz, R. G. ; Oba-Shinjo, S. M. ; Scrideli, C. A. ; Nagahashi, S. M. K. ; Tone, L. G. ; Valera, E. T.
A simplified approach using Taqman low-density array for medulloblastoma subgrouping.
Acta Neuropathologica Communications 7(1), 33 (2019) [10.1186/s40478-019-0681-y]2019 DBCoverage Fulltext by Pubmed Central BibTeX | EndNote: XML, Text | RIS

Buhl, J. L. (First author) ; Selt, F. ; Hielscher, T. ; Guiho, R. ; Ecker, J. ; Sahm, F. ; Ridinger, J. ; Riehl, D. ; Usta, D. ; Ismer, B. ; Sommerkamp, A. C. ; Martinez-Barbera, J. P. ; Wefers, A. K. ; Remke, M. ; Picard, D. ; Pusch, S. ; Gronych, J. ; Oehme, I. ; van Tilburg, C. M. ; Kool, M. ; Kuhn, D. ; Capper, D. ; von Deimling, A. ; Schuhmann, M. U. ; Herold-Mende, C. ; Korshunov, A. ; Brummer, T. ; Pfister, S. ; Jones, D. ; Witt, O. ; Milde, T. (Last author)
The Senescence-associated Secretory Phenotype Mediates Oncogene-induced Senescence in Pediatric Pilocytic Astrocytoma.
Clinical cancer research 25(6), 1851 - 1866 (2019) [10.1158/1078-0432.CCR-18-1965]2019 BibTeX | EndNote: XML, Text | RIS

Lee, J. C. ; Villanueva-Meyer, J. E. ; Ferris, S. P. ; Sloan, E. A. ; Hofmann, J. W. ; Hattab, E. M. ; Williams, B. J. ; Guo, H. ; Torkildson, J. ; Florez, A. ; Van Ziffle, J. ; Onodera, C. ; Grenert, J. P. ; Cho, S.-J. ; Horvai, A. E. ; Jones, D. ; Pfister, S. ; Koelsche, C. ; von Deimling, A. ; Korshunov, A. ; Perry, A. ; Solomon, D. A.
Primary intracranial sarcomas with DICER1 mutation often contain prominent eosinophilic cytoplasmic globules and can occur in the setting of neurofibromatosis type 1.
Acta neuropathologica 137(3), 521 - 525 (2019) [10.1007/s00401-019-01960-x]2019 pmc Fulltext by Pubmed Central BibTeX | EndNote: XML, Text | RIS

Jaunmuktane, Z. ; Capper, D. ; Jones, D. ; Schrimpf, D. ; Sill, M. ; Dutt, M. ; Suraweera, N. ; Pfister, S. ; von Deimling, A. ; Brandner, S.
Methylation array profiling of adult brain tumours: diagnostic outcomes in a large, single centre.
Acta Neuropathologica Communications 7(1), 24 (2019) [10.1186/s40478-019-0668-8]2019 DBCoverage Fulltext by Pubmed Central BibTeX | EndNote: XML, Text | RIS

Siegfried, A. ; Rousseau, A. ; Maurage, C.-A. ; Pericart, S. ; Nicaise, Y. ; Escudie, F. ; Grand, D. ; Delrieu, A. ; Gomez-Brouchet, A. ; Le Guellec, S. ; Franchet, C. ; Boetto, S. ; Vinchon, M. ; Sol, J.-C. ; Roux, F.-E. ; Rigau, V. ; Bertozzi, A.-I. ; Jones, D. ; Figarella-Branger, D. ; Uro-Coste, E.
EWSR1-PATZ1 gene fusion may define a new glioneuronal tumor entity.
Brain pathology 29(1), 53 - 62 (2019) [10.1111/bpa.12619]2019 BibTeX | EndNote: XML, Text | RIS

Erkek, S. (First author) ; Johann, P. (First author) ; Finetti, M. A. ; Drosos, Y. ; Chou, H.-C. ; Zapatka, M. ; Sturm, D. ; Jones, D. ; Korshunov, A. ; Rhyzova, M. ; Wolf, S. ; Mallm, J.-P. ; Beck, K. ; Witt, O. ; Kulozik, A. E. ; Frühwald, M. C. ; Northcott, P. A. ; Korbel, J. O. ; Lichter, P. ; Eils, R. ; Gajjar, A. ; Roberts, C. W. M. ; Williamson, D. ; Hasselblatt, M. ; Chavez, L. (Last author) ; Pfister, S. (Last author) ; Kool, M. (Last author)
Comprehensive Analysis of Chromatin States in Atypical Teratoid/Rhabdoid Tumor Identifies Diverging Roles for SWI/SNF and Polycomb in Gene Regulation.
Cancer cell 35(1), 95 - 110.e8 (2019) [10.1016/j.ccell.2018.11.014]2019 pmc Fulltext by Pubmed Central BibTeX | EndNote: XML, Text | RIS

Wick, W. (First author) ; Dettmer, S. ; Berberich, A. ; Kessler, T. ; Karapanagiotou-Schenkel, I. ; Wick, A. ; Winkler, F. ; Pfaff, E. ; Brors, B. ; Debus, J. ; Unterberg, A. ; Bendszus, M. ; Herold-Mende, C. ; Eisenmenger, A. ; von Deimling, A. ; Jones, D. ; Pfister, S. ; Sahm, F. ; Platten, M. (Last author)
N2M2 (NOA20) phase I/II trial of molecularly matched targeted therapies plus radiotherapy in patients with newly diagnosed non-MGMT hypermethylated glioblastoma.
Neuro-Oncology 21(1), 95-105 (2019) [10.1093/neuonc/noy161]2019 BibTeX | EndNote: XML, Text | RIS

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