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Jäger, N. (Last author) Bioinformatics workflows for clinical applications in precision oncology.
Seminars in cancer biology 84 , 103-112 (2022 ) [10.1016/j.semcancer.2020.12.020 ] 2022
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Juhnke, B.-O. ; Gessi, M. ; Gerber, N. U. ; Friedrich, C. ; Mynarek, M. ; von Bueren, A. O. ; Haberler, C. ; Schüller, U. ; Kortmann, R.-D. ; Timmermann, B. ; Bison, B. ; Warmuth-Metz, M. ; Kwiecien, R. ; Pfister, S. M. ; Spix, C. ; Pietsch, T. ; Kool, M. ; Rutkowski, S. ; von Hoff, K. Treatment of Embryonal Tumours with Multilayered Rosettes with Carboplatin/Etoposide Induction and High-dose Chemotherapy within the Prospective P-HIT Trial.
Neuro-Oncology 24 (1 ), 127-137 (2022 ) [10.1093/neuonc/noab100 ] 2022
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Riemondy, K. A. ; Venkataraman, S. ; Willard, N. ; Nellan, A. ; Sanford, B. ; Griesinger, A. M. ; Amani, V. ; Mitra, S. ; Hankinson, T. C. ; Handler, M. H. ; Sill, M. ; Ocasio, J. ; Weir, S. J. ; Malawsky, D. S. ; Gershon, T. R. ; Garancher, A. ; Wechsler-Reya, R. J. ; Hesselberth, J. R. ; Foreman, N. K. ; Donson, A. M. ; Vibhakar, R. Neoplastic and immune single cell transcriptomics define subgroup-specific intra-tumoral heterogeneity of childhood medulloblastoma
Neuro-Oncology 24 (2 ), 273?286 (2022 ) [10.1093/neuonc/noab135 ] 2022
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Hemminki, K. ; Försti, A. ; Hemminki, A. ; Ljungberg, B. ; Hemminki, O. Incidence trends in lung and bladder cancers in the Nordic Countries before and after the smoking epidemic
European journal of cancer prevention 31 (3 ), 228-234 (2022 ) [10.1097/CEJ.0000000000000694 ] 2022
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Richardson, S. ; Hill, R. M. ; Kui, C. ; Lindsey, J. C. ; Grabovksa, Y. ; Keeling, C. ; Pease, L. ; Bashton, M. ; Crosier, S. ; Vinci, M. ; André, N. ; Figarella-Branger, D. ; Hansford, J. R. ; Lastowska, M. ; Zakrzewski, K. ; Jorgensen, M. ; Pickles, J. C. ; Taylor, M. D. ; Pfister, S. M. ; Wharton, S. B. ; Pizer, B. ; Michalski, A. ; Joshi, A. ; Jacques, T. S. ; Hicks, D. ; Schwalbe, E. C. ; Williamson, D. ; Ramaswamy, V. ; Bailey, S. ; Clifford, S. C. Emergence and maintenance of actionable genetic drivers at medulloblastoma relapse.
Neuro-Oncology 24 (1 ), 153-165 (2022 ) [10.1093/neuonc/noab178 ] 2022
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Massimino, M. ; Barretta, F. ; Modena, P. ; Johann, P. ; Ferroli, P. ; Antonelli, M. ; Gandola, L. ; Garrè, M. L. ; Bertin, D. ; Mastronuzzi, A. ; Mascarin, M. ; Quaglietta, L. ; Viscardi, E. ; Sardi, I. ; Ruggiero, A. ; Boschetti, L. ; Giagnacovo, M. ; Biassoni, V. ; Schiavello, E. ; Chiapparini, L. ; Erbetta, A. ; Mussano, A. ; Giussani, C. ; Mura, R. M. ; Barra, S. ; Scarzello, G. ; Scimone, G. ; Carai, A. ; Giangaspero, F. ; Buttarelli, F. R. Treatment and outcome of intracranial ependymoma after first relapse in AIEOP 2 nd protocol.
Neuro-Oncology 24 (3 ), 467?479 (2022 ) [10.1093/neuonc/noab230 ] 2022
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Delaidelli, A. ; Dunham, C. ; Santi, M. ; Negri, G. L. ; Triscott, J. ; Zheludkova, O. ; Golanov, A. ; Ryzhova, M. ; Okonechnikov, K. ; Schrimpf, D. ; Stichel, D. ; Ellison, D. W. ; von Deimling, A. ; Kool, M. ; Pfister, S. ; Ramaswamy, V. ; Korshunov, A. ; Taylor, M. D. ; Sorensen, P. H. Clinically Tractable Outcome Prediction of non-WNT/non-SHH Medulloblastoma Based on TPD52 Immunohistochemistry in a Multicohort Study.
Clinical cancer research 28 (1 ), 116-128 (2022 ) [10.1158/1078-0432.CCR-21-2057 ] 2022
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Diaz Coronado, R. Y. ; Mynarek, M. ; Koelsche, C. ; Mora Alferez, P. ; Casavilca Zambrano, S. ; Wachtel Aptowitzer, A. ; Sahm, F. ; Deimling, A. ; Schüller, U. ; Spohn, M. ; Sturm, D. ; Pfister, S. M. ; Morales La Madrid, A. ; Sernaque Quintana, R. ; Sarria Bardales, G. ; Negreiros Chinchihuara, T. ; Ojeda Medina, L. ; Garcia-Corrochano Medina, P. ; Campos Sanchez, D. A. ; Ponce Farfan, J. ; Rutkowski, S. ; Garcia Leon, J. L. Primary central nervous system sarcoma with DICER1 mutation?treatment results of a novel molecular entity in pediatric Peruvian patients
Cancer cytopathology 128 (4 ), 697-707 (2022 ) [10.1002/cncr.33977 ] 2022
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Jenseit, A. L. (First author) ; Camgoz, A. (First author) ; Pfister, S. M. ; Kool, M. (Last author) EZHIP: a new piece of the puzzle towards understanding pediatric posterior fossa ependymoma.
Acta neuropathologica 143 (1 ), 1-13 (2022 ) [10.1007/s00401-021-02382-4 ] 2022
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ElHarouni, D. (First author) ; Berker, Y. ; Peterziel, H. ; Gopisetty, A. ; Turunen, L. ; Kreth, S. ; Stainczyk, S. A. ; Oehme, I. ; Pietiäinen, V. ; Jäger, N. ; Witt, O. ; Schlesner, M. ; Oppermann, S. (Last author) iTReX: Interactive exploration of mono- and combination therapy dose response profiling data.
Pharmacological research 175 , 105996 (2022 ) [10.1016/j.phrs.2021.105996 ] 2022
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Pfister, S. (First author) ; Reyes-Múgica, M. ; Chan, J. K. C. ; Hasle, H. ; Lazar, A. J. ; Rossi, S. ; Ferrari, A. ; Jarzembowski, J. A. ; Pritchard-Jones, K. ; Hill, D. A. ; Jacques, T. S. ; Wesseling, P. ; López Terrada, D. H. ; von Deimling, A. ; Kratz, C. P. ; Cree, I. A. ; Alaggio, R. A Summary of the Inaugural WHO Classification of Pediatric Tumors: Transitioning from the Optical into the Molecular Era.
Cancer discovery 12 (2 ), 331-355 (2022 ) [10.1158/2159-8290.CD-21-1094 ] 2022
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Thieme, A. ; Maurus, K. ; Ernestus, K. ; Hirsch, S. ; Schramm, K. ; Wirth, C. ; Buck, A. ; Härtel, C. ; Schlegel, P. G. ; Eyrich, M. ; Woelfl, M. ; Classen, C. F. ; Wiegering, V. A. Secondary Biphenotypic Acute Leukemia Following Rosai-Dorfman-Disease A Coincidence?
Klinische Pa?diatrie 234 (03 ), 169-171 (2022 ) [10.1055/a-1699-3016 ] 2022
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Keller, K. M. ; Krausert, S. (First author) ; Gopisetty, A. ; Luedtke, D. ; Koster, J. ; Schubert, N. A. ; Rodríguez, A. ; van Hooff, S. R. ; Stichel, D. ; Dolman, M. E. M. ; Vassal, G. ; Pfister, S. M. ; Caron, H. N. ; Stancato, L. F. ; Molenaar, J. J. ; Jäger, N. (Last author) ; Kool, M. (Last author) Target Actionability Review: a systematic evaluation of replication stress as a therapeutic target for paediatric solid malignancies.
European journal of cancer 162 , 107 - 117 (2022 ) [10.1016/j.ejca.2021.11.030 ] 2022
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Hemminki, K. ; Försti, A. ; Hemminki, A. ; Ljungberg, B. ; Hemminki, O. Survival in bladder and upper urinary tract cancers in Finland and Sweden through 50 years.
PLOS ONE 17 (1 ), e0261124 - (2022 ) [10.1371/journal.pone.0261124 ] 2022
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Cidre-Aranaz, F. (First author) ; Li, J. ; Hölting, T. L. B. ; Orth, M. F. ; Imle, R. ; Kutschmann, S. ; Ammirati, G. ; Ceranski, K. ; Carreño-Gonzalez, M. J. ; Kasan, M. ; Marchetto, A. ; Funk, C. M. ; Bestvater, F. ; Bersini, S. ; Arrigoni, C. ; Moretti, M. ; Thiel, U. ; Baumhoer, D. ; Sahm, F. ; Pfister, S. M. ; Hartmann, W. ; Dirksen, U. ; Romero-Pérez, L. ; Banito, A. ; Ohmura, S. ; Musa, J. ; Kirchner, T. ; Knott, M. M. L. ; Grünewald, T. (Last author) Integrative gene network and functional analyses identify a prognostically relevant key regulator of metastasis in Ewing sarcoma.
Molecular cancer 21 (1 ), 1 (2022 ) [10.1186/s12943-021-01470-z ] 2022
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Ajore, R. ; Niroula, A. ; Pertesi, M. ; Cafaro, C. ; Thodberg, M. ; Went, M. ; Bao, E. L. ; Duran-Lozano, L. ; Lopez de Lapuente Portilla, A. ; Olafsdottir, T. ; Ugidos-Damboriena, N. ; Magnusson, O. ; Samur, M. ; Lareau, C. A. ; Halldorsson, G. H. ; Thorleifsson, G. ; Norddahl, G. L. ; Gunnarsdottir, K. ; Försti, A. ; Goldschmidt, H. ; Hemminki, K. ; van Rhee, F. ; Kimber, S. ; Sperling, A. S. ; Kaiser, M. ; Anderson, K. ; Jonsdottir, I. ; Munshi, N. ; Rafnar, T. ; Waage, A. ; Weinhold, N. ; Thorsteinsdottir, U. ; Sankaran, V. G. ; Stefansson, K. ; Houlston, R. ; Nilsson, B. Functional dissection of inherited non-coding variation influencing multiple myeloma risk.
Nature Communications 13 (1 ), 151 (2022 ) [10.1038/s41467-021-27666-x ] 2022
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Ebrahimi, A. (First author) ; Korshunov, A. ; Reifenberger, G. ; Capper, D. ; Felsberg, J. ; Trisolini, E. ; Pollo, B. ; Calatozzolo, C. ; Prinz, M. ; Staszewski, O. ; Schweizer, L. ; Schittenhelm, J. ; Harter, P. ; Paulus, W. ; Thomas, C. ; Kohlhof-Meinecke, P. ; Seiz-Rosenhagen, M. ; Milde, T. ; Casalini, M. B. ; Suwala, A. ; Wefers, A. K. ; Reinhardt, A. ; Sievers, P. ; Kramm, C. M. ; Etminam, N. ; Unterberg, A. ; Wick, W. ; Herold-Mende, C. ; Sturm, D. ; Pfister, S. M. ; Sill, M. ; Jones, D. T. W. ; Schrimpf, D. ; Reuss, D. E. ; Aldape, K. ; Abdullaev, Z. ; Sahm, F. ; von Deimling, A. ; Stichel, D. (Last author) Pleomorphic xanthoastrocytoma is a heterogeneous entity with pTERT mutations prognosticating shorter survival.
Acta Neuropathologica Communications 10 (1 ), 5 (2022 ) [10.1186/s40478-021-01308-1 ] 2022
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Ritzmann, T. A. ; Chapman, R. J. ; Kilday, J.-P. ; Thorp, N. ; Modena, P. ; Dineen, R. A. ; Macarthur, D. ; Mallucci, C. ; Jaspan, T. ; Pajtler, K. ; Giagnacovo, M. ; Jacques, T. S. ; Paine, S. M. L. ; Ellison, D. W. ; Bouffet, E. ; Grundy, R. G. ; consortium, B. (Collaboration Author) SIOP Ependymoma I: Final results, long term follow-up and molecular analysis of the trial cohort: A BIOMECA Consortium Study.
Neuro-Oncology 24 (6 ), 936-948 (2022 ) [10.1093/neuonc/noac012 ] 2022
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Sun, Y.-C. ; Sun, P. ; Xue, J. ; Du, Y. ; Yan, H. ; Wang, L.-W. ; Yi, X.-X. ; Sun, J.-G. ; Zhang, X. ; Gao, J.-L. Arthrobacter wenxiniae sp. nov., a novel plant growth-promoting rhizobacteria species harbouring a carotenoids biosynthetic gene cluster.
Antonie van Leeuwenhoek 115 (3 ), 353-364 (2022 ) [10.1007/s10482-021-01701-9 ] 2022
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Hasselblatt, M. ; Thomas, C. ; Federico, A. ; Bens, S. ; Hellström, M. ; Casar-Borota, O. ; Kordes, U. ; Neumann, J. E. ; Dottermusch, M. ; Rodriguez, F. J. ; Lo, A. C. ; Cheng, S. ; Hendson, G. ; Hukin, J. ; Hartmann, C. ; Koch, A. ; Capper, D. ; Siebert, R. ; Paulus, W. ; Nemes, K. ; Johann, P. D. ; Frühwald, M. C. ; Kool, M. (Last author) Low-grade diffusely infiltrative tumour (LGDIT), SMARCB1-mutant: a clinical and histopathological distinct entity showing epigenetic similarity with ATRT-MYC.
Neuropathology & applied neurobiology 48 (4 ), e12797 (2022 ) [10.1111/nan.12797 ] 2022
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Ferrari, A. ; Spunt, S. L. ; Sparber-Sauer, M. ; Walterhouse, D. O. ; Pajtler, K. W. ; Meyer, W. H. ; Orbach, D. ; Weiss, A. Controversies and challenges in the management of paediatric non-rhabdomyosarcoma soft tissue sarcomas.
The lancet child & adolescent health 6 (4 ), 221-223 (2022 ) [10.1016/S2352-4642(22)00036-0 ] 2022
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Nemes, K. ; Johann, P. D. ; Tüchert, S. ; Melchior, P. ; Vokuhl, C. ; Siebert, R. ; Furtwängler, R. ; Frühwald, M. C. Current and Emerging Therapeutic Approaches for Extracranial Malignant Rhabdoid Tumors.
Cancer management and research 14 , 479-498 (2022 ) [10.2147/CMAR.S289544 ] 2022
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Ghasemi, D. R. (First author) ; Fleischhack, G. ; Milde, T. ; Pajtler, K. (Last author) The Current Landscape of Targeted Clinical Trials in Non-WNT/Non-SHH Medulloblastoma
Cancers 14 (3 ), 679 (2022 ) [10.3390/cancers14030679 ] 2022
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Obrecht, D. ; Mynarek, M. ; Hagel, C. ; Kwiecien, R. ; Spohn, M. ; Bockmayr, M. ; Bison, B. ; Pfister, S. M. ; Jones, D. T. W. ; Sturm, D. ; von Deimling, A. ; Sahm, F. ; von Hoff, K. ; Juhnke, B.-O. ; Benesch, M. ; Gerber, N. U. ; Friedrich, C. ; von Bueren, A. O. ; Kortmann, R.-D. ; Schwarz, R. ; Pietsch, T. ; Fleischhack, G. ; Schüller, U. ; Rutkowski, S. Clinical and molecular characterization of isolated M1 disease in pediatric medulloblastoma: experience from the German HIT-MED studies.
Journal of neuro-oncology 157 (1 ), 37-48 (2022 ) [10.1007/s11060-021-03913-5 ] 2022
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Fresnais, M. ; Karabulut, S. ; Abou Zeed, Y. ; Ungermann, J. ; Benzel, J. ; Pajtler, K. W. ; Pfister, S. M. ; Haefeli, W. E. ; Burhenne, J. ; Longuespée, R. Important Requirements for the Selection of Internal Standards during the Development of Desorption/Ionization Assays for Drug Quantification in Biological Matrices-A Practical Example.
Molecules 27 (3 ), 690 (2022 ) [10.3390/molecules27030690 ] 2022
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Holsten, T. ; Bronsema, A. ; Sturm, D. ; Sahm, F. ; Rutkowski, S. ; Schüller, U. ; Wößmann, W. ; Kordes, U. R. ALK inhibition as a salvage therapy for a relapsed unclassifiable sarcomatous CNS tumor with EML4/ALK fusion in an infant.
Pediatric blood & cancer 69 (8 ), e29594 (2022 ) [10.1002/pbc.29594 ] 2022
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Gaab, C. ; Adolph, J. E. ; Tippelt, S. ; Mikasch, R. ; Obrecht, D. ; Mynarek, M. ; Rutkowski, S. ; Pfister, S. M. ; Milde, T. ; Witt, O. ; Bison, B. ; Warmuth-Metz, M. ; Kortmann, R.-D. ; Dietzsch, S. ; Pietsch, T. ; Timmermann, B. ; Sträter, R. ; Bode, U. ; Faldum, A. ; Kwiecien, R. ; Fleischhack, G. Local and Systemic Therapy of Recurrent Medulloblastomas in Children and Adolescents: Results of the P-HIT-REZ 2005 Study
Cancers 14 (3 ), 471 (2022 ) [10.3390/cancers14030471 ] 2022
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Hemminki, K. ; Försti, A. ; Hemminki, O. ; Liska, V. ; Hemminki, A. Long-term incidence and survival trends in cancer of the gallbladder and extrahepatic bile ducts in Denmark, Finland, Norway and Sweden with etiological implications related to Thorotrast.
International journal of cancer 151 (2 ), 200-208 (2022 ) [10.1002/ijc.33980 ] 2022
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Zhu, L. (First author) ; Miao, B. (First author) ; Dymerska, D. ; Kuswik, M. ; Bueno-Martínez, E. ; Sanoguera-Miralles, L. ; Velasco, E. A. ; Paramasivam, N. ; Schlesner, M. ; Kumar, A. ; Yuan, Y. ; Lubinski, J. ; Bandapalli, O. R. ; Hemminki, K. (Last author) ; Försti, A. (Last author) Germline Variants of CYBA and TRPM4 Predispose to Familial Colorectal Cancer
Cancers 14 (3 ), 670 (2022 ) [10.3390/cancers14030670 ] 2022
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Gatzweiler, C. (First author) ; Ridinger, J. ; Herter, S. ; Gerloff, X. F. ; ElHarouni, D. ; Berker, Y. ; Imle, R. ; Schmitt, L. ; Kreth, S. ; Stainczyk, S. ; Ayhan, S. ; Najafi, S. ; Krunic, D. ; Frese, K. ; Meder, B. ; Reuss, D. ; Fiesel, P. ; Schramm, K. ; Blattner-Johnson, M. ; Jones, D. T. W. ; Banito, A. ; Westermann, F. ; Oppermann, S. ; Milde, T. ; Peterziel, H. ; Witt, O. ; Oehme, I. (Last author) Functional Therapeutic Target Validation Using Pediatric Zebrafish Xenograft Models.
Cancers 14 (3 ), 849 (2022 ) [10.3390/cancers14030849 ] 2022
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Koskinen, A. I. ; Hemminki, O. ; Försti, A. ; Hemminki, K. Incidence and survival in oral and pharyngeal cancers in Finland and Sweden through half century.
BMC cancer 22 (1 ), 227 (2022 ) [10.1186/s12885-022-09337-2 ] 2022
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Roosen, M. ; Odé, Z. ; Bunt, J. ; Kool, M. (Last author) The oncogenic fusion landscape in pediatric CNS neoplasms
Acta neuropathologica 143 (4 ), 427-451 (2022 ) [10.1007/s00401-022-02405-8 ] 2022
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Sun, Y.-C. ; Sun, P. ; Xue, J. ; Du, Y. ; Yan, H. ; Wang, L.-W. ; Yi, X.-X. ; Sun, J.-G. ; Zhang, X. ; Gao, J.-L. Correction to: Arthrobacter wenxiniae sp. nov., a novel plant growth-promoting rhizobacteria species harbouring a carotenoids biosynthetic gene cluster.
Antonie van Leeuwenhoek 115 (5 ), 697 (2022 ) [10.1007/s10482-022-01719-7 ] 2022
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Miao, B. (First author) ; Skopelitou, D. ; Srivastava, A. ; Giangiobbe, S. ; Dymerska, D. ; Paramasivam, N. ; Kumar, A. ; Ku?wik, M. ; Klu?niak, W. ; Paszkowska-Szczur, K. ; Schlesner, M. ; Lubinski, J. ; Hemminki, K. ; Försti, A. ; Bandapalli, O. R. (Last author) Whole-Exome Sequencing Identifies a Novel Germline Variant in PTK7 Gene in Familial Colorectal Cancer.
International journal of molecular sciences 23 (3 ), 1295 (2022 ) [10.3390/ijms23031295 ] 2022
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Sidorova, O. A. ; Sayed, S. ; Paszkowski-Rogacz, M. ; Seifert, M. ; Camgöz, A. ; Roeder, I. ; Bornhäuser, M. ; Thiede, C. ; Buchholz, F. RNAi-Mediated Screen of Primary AML Cells Nominates MDM4 as a Therapeutic Target in NK-AML with DNMT3A Mutations.
Cells 11 (5 ), 854 (2022 ) [10.3390/cells11050854 ] 2022
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Schultz-Rogers, L. E. ; Thayer, M. L. ; Kambakam, S. ; Wierson, W. A. ; Helmer, J. A. ; Wishman, M. D. ; Wall, K. A. ; Greig, J. L. ; Forsman, J. L. ; Puchhalapalli, K. ; Nair, S. ; Weiss, T. J. ; Luiken, J. M. ; Blackburn, P. R. ; Ekker, S. C. ; Kool, M. ; McGrail, M. Rbbp4 loss disrupts neural progenitor cell cycle regulation independent of Rb and leads to Tp53 acetylation and apoptosis.
Developmental dynamics 251 (8 ), 1267-1290 (2022 ) [10.1002/dvdy.467 ] 2022
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Kaltenbacher, T. ; Löprich, J. ; Maresch, R. ; Weber, J. ; Müller, S. ; Oellinger, R. ; Groß, N. ; Griger, J. ; de Andrade Krätzig, N. ; Avramopoulos, P. ; Ramanujam, D. ; Brummer, S. ; Widholz, S. A. ; Bärthel, S. ; Falcomatà, C. ; Pfaus, A. ; Alnatsha, A. ; Mayerle, J. ; Schmidt-Supprian, M. ; Reichert, M. ; Schneider, G. ; Ehmer, U. ; Braun, C. J. ; Saur, D. K. M. ; Engelhardt, S. ; Rad, R. CRISPR somatic genome engineering and cancer modeling in the mouse pancreas and liver.
Nature protocols 17 (4 ), 1142-1188 (2022 ) [10.1038/s41596-021-00677-0 ] 2022
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Graf, M. ; Interlandi, M. ; Moreno, N. ; Holdhof, D. ; Göbel, C. ; Melcher, V. ; Mertins, J. ; Albert, T. K. ; Kastrati, D. ; Alfert, A. ; Holsten, T. ; de Faria, F. ; Meisterernst, M. ; Rossig, C. ; Warmuth-Metz, M. ; Nowak, J. ; Meyer Zu Hörste, G. ; Mayère, C. ; Nef, S. ; Johann, P. ; Frühwald, M. C. ; Dugas, M. ; Schüller, U. ; Kerl, K. Single-cell transcriptomics identifies potential cells of origin of MYC rhabdoid tumors.
Nature Communications 13 (1 ), 1544 (2022 ) [10.1038/s41467-022-29152-4 ] 2022
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Patel Jamilkhan, A. (First author) ; Dogan, H. ; Payne, A. ; Krause, E. ; Sievers, P. ; Schoebe, N. ; Schrimpf, D. ; Blume, C. ; Stichel, D. ; Holmes, N. ; Euskirchen, P. ; Hench, J. ; Frank, S. ; Rosenstiel-Goidts, V. ; Ratliff, M. ; Etminan, N. ; Unterberg, A. ; Dieterich, C. ; Herold-Mende, C. ; Pfister, S. M. ; Wick, W. ; Loose, M. ; von Deimling, A. ; Sill, M. ; Jones, D. T. W. ; Schlesner, M. ; Sahm, F. (Last author) Rapid-CNS2: rapid comprehensive adaptive nanopore-sequencing of CNS tumors, a proof-of-concept study.
Acta neuropathologica 143 (5 ), 609-612 (2022 ) [10.1007/s00401-022-02415-6 ] 2022
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Gringmuth, M. ; Walther, J. ; Greiser, S. ; Toussaint, M. ; Schwalm, B. ; Kool, M. ; Kortmann, R.-D. ; Glasow, A. ; Patties, I. Enhanced Survival of High-Risk Medulloblastoma-Bearing Mice after Multimodal Treatment with Radiotherapy, Decitabine, and Abacavir
International journal of molecular sciences 23 (7 ), 3815 (2022 ) [10.3390/ijms23073815 ] 2022
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Clay-Gilmour, A. ; Chattopadhyay, S. ; Hildebrandt, M. A. T. ; Thomsen, H. ; Weinhold, N. ; Vodicka, P. ; Vodickova, L. ; Hoffmann, P. ; Nöthen, M. M. ; Jöckel, K.-H. ; Schmidt, B. ; Langer, C. ; Hajek, R. ; Hallmans, G. ; Pettersson-Kymmer, U. ; Ohlsson, C. ; Späth, F. ; Houlston, R. ; Goldschmidt, H. ; Manasanch, E. E. ; Norman, A. ; Kumar, S. ; Rajkumar, S. V. ; Slager, S. ; Försti, A. ; Vachon, C. M. ; Hemminki, K. Genome-wide meta-analysis of monoclonal gammopathy of undetermined significance (MGUS) identifies risk loci impacting IRF-6.
Blood cancer journal 12 (4 ), 60 (2022 ) [10.1038/s41408-022-00658-w ] 2022
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Hemminki, K. ; Tichanek, F. ; Försti, A. ; Hemminki, O. ; Liska, V. ; Hemminki, A. Long-term incidence in hepatocellular carcinoma and intrahepatic bile duct cancer in Denmark, Finland, Norway and Sweden, role of Thorotrast?
International journal of cancer 151 (4 ), 510-517 (2022 ) [10.1002/ijc.34031 ] 2022
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Hasselblatt, M. ; Thomas, C. ; Federico, A. ; Nemes, K. ; Johann, P. D. ; Bison, B. ; Bens, S. ; Dahlum, S. ; Kordes, U. ; Redlich, A. ; Lessel, L. ; Pajtler, K. W. ; Mawrin, C. ; Schüller, U. ; Nolte, K. ; Kramm, C. M. ; Hinz, F. ; Sahm, F. ; Giannini, C. ; Penkert, J. ; Kratz, C. P. ; Pfister, S. M. ; Siebert, R. ; Paulus, W. ; Kool, M. ; Frühwald, M. C. SMARCB1-deficient and SMARCA4-deficient Malignant Brain Tumors With Complex Copy Number Alterations andTP53Mutations May Represent the First Clinical Manifestation of Li-Fraumeni Syndrome.
The American journal of surgical pathology 46 (9 ), 1277-1283 (2022 ) [10.1097/PAS.0000000000001905 ] 2022
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Beck, P. (First author) ; Selle, B. ; Madenach, L. ; Jones, D. T. W. ; Vokuhl, C. ; Gopisetty, A. ; Nabbi, A. ; Brecht, I. B. ; Ebinger, M. ; Wegert, J. ; Graf, N. ; Gessler, M. ; Pfister, S. M. ; Jäger, N. (Last author) The genomic landscape of pediatric renal cell carcinomas.
iScience 25 (4 ), 104167 (2022 ) [10.1016/j.isci.2022.104167 ] 2022
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Hemminki, K. ; Sundquist, K. ; Sundquist, J. ; Försti, A. ; Liska, V. ; Hemminki, A. ; Li, X. Familial Risks for Liver, Gallbladder and Bile Duct Cancers and for Their Risk Factors in Sweden, a Low-Incidence Country
Cancers 14 (8 ), 1938 (2022 ) [10.3390/cancers14081938 ] 2022
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Hemminki, K. ; Kanerva, A. ; Försti, A. ; Hemminki, A. Cervical, vaginal and vulvar cancer incidence and survival trends in Denmark, Finland, Norway and Sweden with implications to treatment.
BMC cancer 22 (1 ), 456 (2022 ) [10.1186/s12885-022-09582-5 ] 2022
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Ferrari, A. ; Orbach, D. ; Sparber-Sauer, M. ; Walterhouse, D. O. ; Pajtler, K. W. ; Meyer, W. H. ; Spunt, S. L. ; Weiss, A. R. The treatment approach to pediatric non-rhabdomyosarcoma soft tissue sarcomas: a critical review from the INternational Soft Tissue SaRcoma ConsorTium.
European journal of cancer 169 , 10 - 19 (2022 ) [10.1016/j.ejca.2022.03.028 ] 2022
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Radke, J. ; Ishaque, N. ; Koll, R. ; et al The genomic and transcriptional landscape of primary central nervous system lymphoma.
Nature Communications 13 (1 ), 2558 (2022 ) [10.1038/s41467-022-30050-y ] 2022
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Federico, A. (First author) ; Thomas, C. ; Miskiewicz, K. ; Woltering, N. ; Zin, F. ; Nemes, K. ; Bison, B. ; Johann, P. D. ; Hawes, D. ; Bens, S. ; Kordes, U. ; Albrecht, S. ; Dohmen, H. ; Hauser, P. ; Keyvani, K. ; van Landeghem, F. K. H. ; Lund, E. L. ; Scheie, D. ; Mawrin, C. ; Monoranu, C.-M. ; Parm Ulhøi, B. ; Pietsch, T. ; Reinhard, H. ; Riemenschneider, M. J. ; Sehested, A. ; Sumerauer, D. ; Siebert, R. ; Paulus, W. ; Frühwald, M. C. ; Kool, M. (Last author) ; Hasselblatt, M. ATRT-SHH comprises three molecular subgroups with characteristic clinical and histopathological features and prognostic significance.
Acta neuropathologica 143 (6 ), 697-711 (2022 ) [10.1007/s00401-022-02424-5 ] 2022
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Nemes, K. ; Johann, P. D. ; Steinbügl, M. ; Gruhle, M. ; Bens, S. ; Kachanov, D. ; Teleshova, M. ; Hauser, P. ; Simon, T. ; Tippelt, S. ; Eberl, W. ; Chada, M. ; Lopez, V. S. ; Grigull, L. ; Hernáiz-Driever, P. ; Eyrich, M. ; Pears, J. ; Milde, T. ; Reinhard, H. ; Leipold, A. ; van de Wetering, M. ; Gil-da-Costa, M. J. ; Ebetsberger-Dachs, G. ; Kerl, K. ; Lemmer, A. ; Boztug, H. ; Furtwängler, R. ; Kordes, U. ; Vokuhl, C. ; Hasselblatt, M. ; Bison, B. ; Kröncke, T. ; Melchior, P. ; Timmermann, B. ; Gerss, J. ; Siebert, R. ; Frühwald, M. C. Infants and Newborns with Atypical Teratoid Rhabdoid Tumors (ATRT) and Extracranial Malignant Rhabdoid Tumors (eMRT) in the EU-RHAB Registry: A Unique and Challenging Population
Cancers 14 (9 ), 2185 (2022 ) [10.3390/cancers14092185 ] 2022
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Khalid, U. (First author) ; Simovic, M. ; Hammann, L. A. ; Iskar, M. ; Wong, J. K. L. ; Kumar, R. ; Jugold, M. ; Sill, M. ; Bolkestein, M. ; Kolb, T. ; Hergt, M. ; Devens, F. ; Ecker, J. ; Kool, M. ; Milde, T. ; Westermann, F. ; Benner, A. ; Lewis, J. ; Dietrich, S. ; Pfister, S. M. ; Lichter, P. ; Zapatka, M. ; Ernst, A. (Last author) A synergistic interaction between HDAC- and PARP inhibitors in childhood tumors with chromothripsis.
International journal of cancer 151 (4 ), 590-606 (2022 ) [10.1002/ijc.34027 ] 2022
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Schedel, A. ; Friedrich, U. A. ; Morcos, M. N. F. ; Wagener, R. ; Mehtonen, J. ; Watrin, T. ; Saitta, C. ; Brozou, T. ; Michler, P. ; Walter, C. ; Försti, A. ; Baksi, A. ; Menzel, M. ; Horak, P. ; Paramasivam, N. ; Fazio, G. ; Autry, R. ; Fröhling, S. ; Suttorp, M. ; Gertzen, C. ; Gohlke, H. ; Bhatia, S. ; Wadt, K. ; Schmiegelow, K. ; Dugas, M. ; Richter, D. ; Glimm, H. ; Heinäniemi, M. ; Jessberger, R. ; Cazzaniga, G. ; Borkhardt, A. ; Hauer, J. ; Auer, F. Recurrent Germline Variant in RAD21 Predisposes Children to Lymphoblastic Leukemia or Lymphoma.
International journal of molecular sciences 23 (9 ), 5174 (2022 ) [10.3390/ijms23095174 ] 2022
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Krausert, S. (First author) ; Brabetz, S. (First author) ; Mack, N. L. ; Schmitt-Hoffner, F. ; Schwalm, B. ; Peterziel, H. ; Mangang, A. ; Holland-Letz, T. ; Sieber, L. ; Korshunov, A. ; Oehme, I. ; Jäger, N. ; Witt, O. ; Pfister, S. M. ; Kool, M. (Last author) Predictive modeling of resistance to SMO inhibition in a patient-derived orthotopic xenograft model of SHH medulloblastoma.
Neuro-oncology advances 4 (1 ), vdac026 (2022 ) [10.1093/noajnl/vdac026 ] 2022
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García-Martín, P. ; Díez, A. M. ; Maldonado, J. M. S. ; Serrano, A. J. C. ; Ter Horst, R. ; Benavente, Y. ; Landi, S. ; Macauda, A. ; Clay-Gilmour, A. ; Hernández-Mohedo, F. ; Niazi, Y. ; González-Sierra, P. ; Espinet, B. ; Rodríguez-Sevilla, J. J. ; Maffei, R. ; Blanco, G. ; Giaccherini, M. ; Puiggros, A. ; Cerhan, J. ; Marasca, R. ; Cañadas-Garre, M. ; López-Nevot, M. Á. ; Chen-Liang, T. ; Thomsen, H. ; Gámez, I. ; Moreno, V. ; Marcos-Gragera, R. ; García-Álvarez, M. ; Llorca, J. ; Jerez, A. ; Berndt, S. ; Butrym, A. ; Norman, A. D. ; Casabonne, D. ; Luppi, M. ; Slager, S. L. ; Hemminki, K. ; Li, Y. ; Alcoceba, M. ; Campa, D. ; Canzian, F. ; de Sanjosé, S. ; Försti, A. ; Netea, M. G. ; Jurado, M. ; Sainz, J. Validation and functional characterization of GWAS-identified variants for chronic lymphocytic leukemia: a CRuCIAL study.
Blood cancer journal 12 (5 ), 79 (2022 ) [10.1038/s41408-022-00676-8 ] 2022
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Richter-Pecha?ska, P. ; Kunz, J. B. ; Rausch, T. ; Erarslan-Uysal, B. ; Bornhauser, B. ; Frismantas, V. ; Assenov, Y. ; Zimmermann, M. ; Happich, M. ; von Knebel-Doeberitz, C. ; von Neuhoff, N. ; Köhler, R. ; Stanulla, M. ; Schrappe, M. ; Cario, G. ; Escherich, G. ; Kirschner-Schwabe, R. ; Eckert, C. ; Avigad, S. ; Pfister, S. M. ; Muckenthaler, M. U. ; Bourquin, J.-P. ; Korbel, J. O. ; Kulozik, A. (Last author) Pediatric T-ALL type-1 and type-2 relapses develop along distinct pathways of clonal evolution.
Leukemia 36 (7 ), 1759-1768 (2022 ) [10.1038/s41375-022-01587-0 ] 2022
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von Knebel Doeberitz, N. (First author) ; Paech, D. ; Sturm, D. ; Pusch, S. ; Turcan, S. ; Saunthararajah, Y. Changing paradigms in oncology: toward non-cytotoxic treatments for advanced gliomas.
International journal of cancer 151 (9 ), 1431-1446 (2022 ) [10.1002/ijc.34131 ] 2022
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Skopelitou, D. (First author) ; Srivastava, A. ; Miao, B. ; Kumar, A. ; Dymerska, D. ; Paramasivam, N. ; Schlesner, M. ; Lubinski, J. ; Hemminki, K. ; Försti, A. ; Reddy Bandapalli, O. (Last author) Whole exome sequencing identifies novel germline variants of SLC15A4 gene as potentially cancer predisposing in familial colorectal cancer.
Molecular genetics and genomics 297 (4 ), 965-979 (2022 ) [10.1007/s00438-022-01896-0 ] 2022
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Thorwarth, A. ; Haase, K. ; Röefzaad, C. ; Pajtler, K. ; Schramm, K. ; Hauptmann, K. ; Behnke, A. ; Vokuhl, C. ; Elgeti, T. ; Gratopp, A. ; Schulte, J. ; Scheer, M. ; Hernáiz Driever, P. ; Nysom, K. ; Eggert, A. ; Henssen, A. G. ; Deubzer, H. E. Genomic Evolution and Personalized Therapy of an Infantile Fibrosarcoma Harboring an NTRK Oncogenic Fusion.
JCO precision oncology 6 (6 ), e2100283 (2022 ) [10.1200/PO.21.00283 ] 2022
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Koskinen, A. ; Hemminki, O. ; Försti, A. ; Hemminki, K. Incidence and survival in laryngeal and lung cancers in Finland and Sweden through a half century.
PLOS ONE 17 (5 ), e0268922 - (2022 ) [10.1371/journal.pone.0268922 ] 2022
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Schubert, N. A. ; Chen, C. Y. ; Rodríguez, A. ; Koster, J. ; Dowless, M. ; Pfister, S. M. ; Shields, D. J. ; Stancato, L. F. ; Vassal, G. ; Caron, H. N. ; van den Boogaard, M. L. ; Henssen, A. G. ; Molenaar, J. J. Target actionability review to evaluate CDK4/6 as a therapeutic target in paediatric solid and brain tumours.
European journal of cancer 170 , 196 - 208 (2022 ) [10.1016/j.ejca.2022.04.028 ] 2022
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Catanzaro, G. ; Besharat, Z. M. ; Carai, A. ; Jäger, N. ; Splendiani, E. ; Colin, C. ; Po, A. ; Chiacchiarini, M. ; Citarella, A. ; Gianno, F. ; Cacchione, A. ; Miele, E. ; Diomedi Camassei, F. ; Gessi, M. ; Massimi, L. ; Locatelli, F. ; Jones, D. ; Figarella-Branger, D. ; Pfister, S. ; Mastronuzzi, A. ; Giangaspero, F. ; Ferretti, E. MiR-1248: a new prognostic biomarker able to identify supratentorial hemispheric pediatric low-grade gliomas patients associated with progression.
Biomarker Research 10 (1 ), 44 (2022 ) [10.1186/s40364-022-00389-x ] 2022
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Schweizer, L. ; Hartmann, W. ; Koch, A. ; Nunninger, M. ; Thomale, U.-W. ; Pennacchietti, V. ; Tietze, A. ; Horn, D. ; Pajtler, K. ; Hirsch, S. ; Wieland, I. ; Deubzer, H. ; Rossi, R. ; Hernáiz Driever, P. ; von Hoff, K. ; Zezschwitz, B. v. EVIDENCE OF NEURAL CREST CELL ORIGIN OF A DICER1 MUTANT CNS SARCOMA IN A CHILD WITH DICER1 SYNDROME AND NRAS-MUTANT NEUROCUTANEOUS MELANOSIS.
Neuropathology & applied neurobiology 48 (6 ), e12830 (2022 ) [10.1111/nan.12830 ] 2022
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Fresnais, M. ; Liang, S. ; Breitkopf, M. ; Lindner, J. R. ; Claude, E. ; Pringle, S. ; Levkin, P. A. ; Demir, K. ; Benzel, J. ; Sundheimer, J. ; Statz, B. ; Pajtler, K. ; Pfister, S. ; Haefeli, W. E. ; Burhenne, J. ; Longuespée, R. Analytical Performance Evaluation of New DESI Enhancements for Targeted Drug Quantification in Tissue Sections.
Pharmaceuticals 15 (6 ), 694 (2022 ) [10.3390/ph15060694 ] 2022
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Guerrini-Rousseau, L. ; Masliah-Planchon, J. ; Waszak, S. M. ; Alhopuro, P. ; Benusiglio, P. R. ; Bourdeaut, F. ; Brecht, I. B. ; Del Baldo, G. ; Dhanda, S. K. ; Garrè, M. L. ; Gidding, C. E. M. ; Hirsch, S. ; Hoarau, P. ; Jorgensen, M. ; Kratz, C. ; Lafay-Cousin, L. ; Mastronuzzi, A. ; Pastorino, L. ; Pfister, S. M. ; Schroeder, C. ; Smith, M. J. ; Vahteristo, P. ; Vibert, R. ; Vilain, C. ; Waespe, N. ; Winship, I. M. ; Evans, D. G. ; Brugieres, L. Cancer risk and tumour spectrum in 172 patients with a germline SUFU pathogenic variation: a collaborative study of the SIOPE Host Genome Working Group.
Journal of medical genetics 59 (11 ), 1123-1132 (2022 ) [10.1136/jmedgenet-2021-108385 ] 2022
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Korshunov, A. (First author) ; Okonechnikov, K. ; Stichel, D. ; Schrimpf, D. ; Delaidelli, A. ; Tonn, S. ; Mynarek, M. ; Sievers, P. ; Sahm, F. ; Jones, D. ; von Deimling, A. ; Pfister, S. ; Kool, M. (Last author) Gene expression profiling of Group 3 medulloblastomas defines a clinically tractable stratification based on KIRREL2 expression.
Acta neuropathologica 144 , 339?352 (2022 ) [10.1007/s00401-022-02460-1 ] 2022
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Tsai, J. W. ; Cejas, P. ; Wang, D. K. ; Patel, S. ; Wu, D. W. ; Arounleut, P. ; Wei, X. ; Zhou, N. ; Syamala, S. ; Dubois, F. P. B. ; Crane, A. ; Pelton, K. ; Vogelzang, J. ; Sousa, C. ; Baguette, A. ; Chen, X. ; Condurat, A. L. ; Dixon-Clarke, S. E. ; Zhou, K. N. ; Lu, S. D. ; Gonzalez, E. M. ; Chacon, M. S. ; Digiacomo, J. J. ; Kumbhani, R. ; Novikov, D. ; Hunter, J. ; Tsoli, M. ; Ziegler, D. S. ; Dirksen, U. ; Jäger, N. ; Balasubramanian, G. ; Kramm, C. M. ; Nathrath, M. ; Bielack, S. ; Baker, S. J. ; Zhang, J. ; McFarland, J. M. ; Getz, G. ; Aguet, F. ; Jabado, N. ; Witt, O. ; Pfister, S. ; Ligon, K. L. ; Hovestadt, V. ; Kleinman, C. L. ; Long, H. ; Jones, D. (Last author) ; Bandopadhayay, P. ; Phoenix, T. N. FOXR2 is an epigenetically regulated pan-cancer oncogene that activates ETS transcriptional circuits.
Cancer research 82 (17 ), 2980-3001 (2022 ) [10.1158/0008-5472.CAN-22-0671 ] 2022
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Bartl, J. ; Zanini, M. ; Bernardi, F. ; Forget, A. ; Blümel, L. ; Talbot, J. ; Picard, D. ; Qin, N. ; Cancila, G. ; Gao, Q. ; Nath, S. ; Koumba, I. M. ; Wolter, M. ; Kuonen, F. ; Langini, M. ; Beez, T. ; Munoz, C. ; Pauck, D. ; Marquardt, V. ; Yu, H. ; Souphron, J. ; Korsch, M. ; Mölders, C. ; Berger, D. ; Göbbels, S. ; Meyer, F.-D. ; Scheffler, B. ; Rotblat, B. ; Diederichs, S. ; Ramaswamy, V. ; Suzuki, H. ; Oro, A. ; Stühler, K. ; Stefanski, A. ; Fischer, U. ; Leprivier, G. ; Willbold, D. ; Steger, G. ; Buell, A. ; Kool, M. ; Lichter, P. ; Pfister, S. ; Northcott, P. A. ; Taylor, M. D. ; Borkhardt, A. ; Reifenberger, G. ; Ayrault, O. ; Remke, M. The HHIP-AS1 lncRNA promotes tumorigenicity through stabilization of dynein complex 1 in human SHH-driven tumors.
Nature Communications 13 (1 ), 4061 (2022 ) [10.1038/s41467-022-31574-z ] 2022
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Schepke, E. ; Löfgren, M. ; Pietsch, T. ; Bontell, T. O. ; Kling, T. ; Wenger, A. ; Vega, S. F. ; Danielsson, A. ; Dosa, S. ; Holm, S. ; Öberg, A. ; Nyman, P. ; Eliasson-Hofvander, M. ; Sandström, P.-E. ; Pfister, S. ; Lannering, B. ; Sabel, M. ; Carén, H. DNA methylation profiling improves routine diagnosis of paediatric CNS tumours: a prospective population-based study.
Neuropathology & applied neurobiology 48 (6 ), e12838 (2022 ) [10.1111/nan.12838 ] 2022
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Lindsay, H. B. ; Massimino, M. ; Avula, S. ; Stivaros, S. ; Grundy, R. ; Metrock, K. ; Bhatia, A. ; Fernández-Teijeiro, A. ; Chiapparini, L. ; Bennett, J. ; Wright, K. ; Hoffman, L. M. ; Smith, A. ; Pajtler, K. ; Poussaint, T. Y. ; Warren, K. E. ; Foreman, N. K. ; Mirsky, D. M. Response assessment in paediatric intracranial ependymoma: recommendations from the Response Assessment in Pediatric Neuro-Oncology (RAPNO) working group.
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Rudà, R. ; Capper, D. ; Waldman, A. D. ; Pallud, J. ; Minniti, G. ; Kaley, T. J. ; Bouffet, E. ; Tabatabai, G. ; Aronica, E. ; Jakola, A. S. ; Pfister, S. ; Schiff, D. ; Lassman, A. B. ; Solomon, D. A. ; Soffietti, R. ; Weller, M. ; Preusser, M. ; Idbaih, A. ; Wen, P. Y. ; van den Bent, M. J. Eano-Euracan-Sno Guidelines on Circumscribed Astrocytic GLIOMAS, Glioneuronal and Neuronaltumors
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Autry, R. (Last author) Polygenomic Interrogation of Drug Resistance Genes.
Methods in molecular biology 2535 , 187-210 (2022 ) [ 10.1007/978-1-0716-2513-2_15 ] 2022
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Franceschi, E. ; Giannini, C. ; Furtner, J. ; Pajtler, K. ; Asioli, S. ; Guzman, R. ; Seidel, C. ; Gatto, L. ; Hau, P. Adult Medulloblastoma: Updates on Current Management and Future Perspectives.
Cancers 14 (15 ), 3708 (2022 ) [10.3390/cancers14153708 ] 2022
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Pfister, S. (First author) ; Witt, O. ; Jones, D. (Last author) Pediatric precision oncology-Time for clinical prime time.
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Penkert, J. ; Strüwe, F. J. ; Dutzmann, C. M. ; Doergeloh, B. B. ; Montellier, E. ; Freycon, C. ; Keymling, M. ; Schlemmer, H.-P. ; Sänger, B. ; Hoffmann, B. ; Gerasimov, T. ; Blattmann, C. ; Fetscher, S. ; Frühwald, M. ; Hettmer, S. ; Kordes, U. ; Ridola, V. ; Kroiss Benninger, S. ; Mastronuzzi, A. ; Schott, S. ; Nees, J. ; Prokop, A. ; Redlich, A. ; Seidel, M. G. ; Zimmermann, S. ; Pajtler, K. ; Pfister, S. ; Hainaut, P. ; Kratz, C. P. Genotype?phenotype associations within the Li-Fraumeni spectrum: a report from the German Registry
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Reinhardt, A. (First author) ; Pfister, K. ; Schrimpf, D. ; Stichel, D. ; Sahm, F. ; Reuss, D. E. ; Capper, D. ; Wefers, A. ; Ebrahimi, A. ; Sill, M. ; Felsberg, J. ; Reifenberger, G. ; Becker, A. ; Prinz, M. ; Staszewski, O. ; Hartmann, C. ; Schittenhelm, J. ; Gramatzki, D. ; Weller, M. ; Olar, A. ; Rushing, E. J. ; Bergmann, M. ; Farrell, M. A. ; Blümcke, I. ; Coras, R. ; Beckervordersandforth, J. ; Kim, S. H. ; Rogerio, F. ; Dimova, P. S. ; Niehusmann, P. ; Unterberg, A. ; Platten, M. ; Pfister, S. ; Wick, W. ; Herold-Mende, C. ; von Deimling, A. (Last author) Anaplastic ganglioglioma - a diagnosis comprising several distinct tumour types.
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Kratz, C. P. ; Smirnov, D. ; Autry, R. ; Jäger, N. ; Waszak, S. M. ; Großhennig, A. ; Berutti, R. ; Wendorff, M. ; Hainaut, P. ; Pfister, S. ; Prokisch, H. ; Ripperger, T. ; Malkin, D. Heterozygous BRCA1/2 and Mismatch Repair Gene Pathogenic Variants in Children and Adolescents with Cancer.
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Rautajoki, K. J. ; Jaatinen, S. ; Tiihonen, A. M. ; Annala, M. ; Vuorinen, E. M. ; Kivinen, A. ; Rauhala, M. J. ; Maass, K. ; Pajtler, K. ; Yli-Harja, O. ; Helén, P. ; Haapasalo, J. ; Haapasalo, H. ; Zhang, W. ; Nykter, M. PTPRD and CNTNAP2 as markers of tumor aggressiveness in oligodendrogliomas.
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Sievers, P. (First author) ; Sill, M. ; Schrimpf, D. ; Friedel, D. ; Sturm, D. ; Gardberg, M. ; Kurian, K. M. ; Krskova, L. ; Vicha, A. ; Schaller, T. ; Hagel, C. ; Abdullaev, Z. ; Aldape, K. ; Jacques, T. S. ; Korshunov, A. ; Wick, W. ; Pfister, S. ; von Deimling, A. ; Jones, D. (Last author) ; Sahm, F. (Last author) Epigenetic profiling reveals a subset of pediatric-type glioneuronal tumors characterized by oncogenic gene fusions involving several targetable kinases.
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Macauda, A. (First author) ; Clay-Gilmour, A. ; Hielscher, T. ; et al Does a Multiple Myeloma Polygenic Risk Score Predict Overall Survival of Patients with Myeloma?
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Hemminki, J. ; Försti, A. ; Hemminki, A. ; Hemminki, K. (Last author) Survival trends in solid cancers in the Nordic countries through 50 years.
European journal of cancer 175 , 77 - 85 (2022 ) [10.1016/j.ejca.2022.08.015 ] 2022
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Blümel, L. ; Qin, N. ; Berlandi, J. ; Paisana, E. ; Cascão, R. ; Custódia, C. ; Pauck, D. ; Picard, D. ; Langini, M. ; Stühler, K. ; Meyer, F.-D. ; Göbbels, S. ; Malzkorn, B. ; Liebau, M. C. ; Barata, J. T. ; Jeibmann, A. ; Kerl, K. ; Erkek, S. ; Kool, M. ; Pfister, S. M. ; Johann, P. D. ; Frühwald, M. C. ; Borkhardt, A. ; Reifenberger, G. ; Faria, C. C. ; Fischer, U. ; Hasselblatt, M. ; Bartl, J. ; Remke, M. Primary cilia contribute to the aggressiveness of atypical teratoid/rhabdoid tumors
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Tietze, A. ; Mankad, K. ; Lequin, M. H. ; Ivarsson, L. ; Mirsky, D. ; Jaju, A. ; Kool, M. ; Hoff, K. V. ; Bison, B. ; Löbel, U. Imaging Characteristics of CNS Neuroblastoma- FOXR2 : A Retrospective and Multi-Institutional Description of 25 Cases
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Barana?i?, J. ; ?uti?, M. ; Catalano, C. ; Drpa, G. ; Huhn, S. ; Majhen, D. ; Nesti?, D. ; Kurtovi?, M. ; Rumora, L. ; Bosnar, M. ; Vuki? Dugac, A. ; Sokolovi?, I. ; Popovic-Grle, S. ; Or?oli?, N. ; ?krinjari?-Cincar, S. ; Jakopovi?, M. ; Samar?ija, M. ; Weber, A. N. R. ; Försti, A. (Last author) ; Kne?evi?, J. TLR5 Variants Are Associated with the Risk for COPD and NSCLC Development, Better Overall Survival of the NSCLC Patients and Increased Chemosensitivity in the H1299 Cell Line.
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Hendrikse, L. D. ; Haldipur, P. ; Saulnier, O. ; et al Failure of human rhombic lip differentiation underlies medulloblastoma formation.
Nature <London> 609 (7929 ), 1021-1028 (2022 ) [10.1038/s41586-022-05215-w ] 2022
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Langenberg, K. P. S. ; Meister, M. T. ; Bakhuizen, J. J. ; et al Implementation of paediatric precision oncology into clinical practice: The Individualized Therapies for Children with cancer program 'iTHER'.
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van Ineveld, R. L. ; Collot, R. ; Román, M. B. ; Pagliaro, A. ; Bessler, N. ; Ariese, H. C. R. ; Kleinnijenhuis, M. ; Kool, M. ; Alieva, M. ; Chuva de Sousa Lopes, S. M. ; Wehrens, E. J. ; Rios, A. C. Multispectral confocal 3D imaging of intact healthy and tumor tissue using mLSR-3D
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Brigante, G. ; Lazzaretti, C. ; Paradiso, E. ; Nuzzo, F. ; Sitti, M. ; Tüttelmann, F. ; Moretti, G. ; Silvestri, R. ; Gemignani, F. ; Försti, A. ; Hemminki, K. ; Elisei, R. ; Romei, C. ; Zizzi, E. A. ; Deriu, M. A. ; Simoni, M. ; Landi, S. ; Casarini, L. Genetic signature of differentiated thyroid carcinoma susceptibility: a machine learning approach.
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Berker, Y. ; ElHarouni, D. ; Peterziel, H. ; Fiesel, P. ; Witt, O. ; Oehme, I. ; Schlesner, M. ; Oppermann, S. (Last author) Patient-by-Patient Deep Transfer Learning for Drug-Response Profiling Using Confocal Fluorescence Microscopy of Pediatric Patient-Derived Tumor-Cell Spheroids
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Slavc, I. ; Mayr, L. ; Stepien, N. ; Gojo, J. ; Aliotti Lippolis, M. ; Azizi, A. A. ; Chocholous, M. ; Baumgartner, A. ; Hedrich, C. S. ; Holm, S. ; Sehested, A. ; Leblond, P. ; Dieckmann, K. ; Haberler, C. ; Czech, T. ; Kool, M. ; Peyrl, A. Improved Long-Term Survival of Patients with Recurrent Medulloblastoma Treated with a 'MEMMAT-like' Metronomic Antiangiogenic Approach.
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Fincke, V. E. ; Krulik, M. E. ; Joshi, P. ; Frühwald, M. C. ; Chen, Y.-B. ; Johann, P. (Last author) Renal Medullary Carcinomas Harbor a Distinct Methylation Phenotype and Display Aberrant Methylation of Genes Related to Early Nephrogenesis.
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Hemminki, K. ; Hemminki, J. ; Försti, A. ; Sud, A. Survival trends in hematological malignancies in the Nordic countries through 50 years
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Hemminki, K. (First author) ; Försti, A. ; Hemminki, O. ; Liska, V. ; Hemminki, A. Long-term survival trends for primary liver and pancreatic cancers in the Nordic countries.
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Jurmeister, P. ; Glöß, S. ; Roller, R. F. ; et al DNA methylation-based classification of sinonasal tumors.
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Hendrikse, L. D. ; Haldipur, P. ; Saulnier, O. ; et al Author Correction: Failure of human rhombic lip differentiation underlies medulloblastoma formation.
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Orth, M. F. ; Surdez, D. ; Faehling, T. ; Ehlers, A. ; Marchetto, A. ; Grossetête, S. ; Volckmann, R. ; Zwijnenburg, D. A. ; Gerke, J. S. ; Zaidi, S. ; Alonso, J. ; Sastre, A. ; Baulande, S. ; Sill, M. ; Cidre-Aranaz, F. ; Ohmura, S. ; Kirchner, T. ; Hauck, S. M. ; Reischl, E. ; Gymrek, M. ; Pfister, S. ; Strauch, K. ; Koster, J. ; Delattre, O. ; Grünewald, T. (Last author) Systematic multi-omics cell line profiling uncovers principles of Ewing sarcoma fusion oncogene-mediated gene regulation.
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Sieverling, L. (First author) ; Hong, C. ; Koser, S. D. ; et al Author Correction: Genomic footprints of activated telomere maintenance mechanisms in cancer
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Hemminki, K. (First author) ; Försti, A. (Last author) Incidence, Mortality and Survival Trends in Breast Cancers Coincident with Introduction of Mammography in the Nordic Countries.
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Ajore, R. ; Niroula, A. ; Pertesi, M. ; Cafaro, C. ; Thodberg, M. ; Went, M. ; Bao, E. L. ; Duran-Lozano, L. ; Lopez de Lapuente Portilla, A. ; Olafsdottir, T. ; Ugidos-Damboriena, N. ; Magnusson, O. ; Samur, M. ; Lareau, C. A. ; Halldorsson, G. H. ; Thorleifsson, G. ; Norddahl, G. L. ; Gunnarsdottir, K. ; Försti, A. ; Goldschmidt, H. ; Hemminki, K. ; van Rhee, F. ; Kimber, S. ; Sperling, A. S. ; Kaiser, M. ; Anderson, K. ; Jonsdottir, I. ; Munshi, N. ; Rafnar, T. ; Waage, A. ; Weinhold, N. ; Thorsteinsdottir, U. ; Sankaran, V. G. ; Stefansson, K. ; Houlston, R. ; Nilsson, B. Author Correction: Functional dissection of inherited non-coding variation influencing multiple myeloma risk.
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Rubanova, Y. ; Shi, R. ; Harrigan, C. F. ; et al Author Correction: Reconstructing evolutionary trajectories of mutation signature activities in cancer using TrackSig
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Shuai, S. ; Abascal, F. ; Amin, S. B. ; et al Author Correction: Combined burden and functional impact tests for cancer driver discovery using DriverPower
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Cmero, M. ; Yuan, K. ; Ong, C. S. ; et al Author Correction: Inferring structural variant cancer cell fraction
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Jiao, W. ; Atwal, G. ; Polak, P. ; et al Author Correction: A deep learning system accurately classifies primary and metastatic cancers using passenger mutation patterns
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Paczkowska, M. ; Barenboim, J. ; Sintupisut, N. ; et al Author Correction: Integrative pathway enrichment analysis of multivariate omics data
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Zhang, Y. ; Chen, F. ; Fonseca, N. A. ; et al Author Correction: High-coverage whole-genome analysis of 1220 cancers reveals hundreds of genes deregulated by rearrangement-mediated cis-regulatory alterations
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Bhandari, V. ; Li, C. H. ; Bristow, R. G. ; et al Author Correction: Divergent mutational processes distinguish hypoxic and normoxic tumours
Nature Communications 13 (1 ), 7569 (2022 ) [10.1038/s41467-022-32339-4 ] 2022
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Reyna, M. A. ; Haan, D. ; Paczkowska, M. ; et al Author Correction: Pathway and network analysis of more than 2500 whole cancer genomes
Nature Communications 13 (1 ), 7566 (2022 ) [10.1038/s41467-022-32334-9 ] 2022
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