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Research

Publications of Pediatric Neurooncology

2019

Korshunov, A. (First author) ; Sahm, F. ; Zheludkova, O. ; Golanov, A. ; Stichel, D. ; Schrimpf, D. ; Ryzhova, M. ; Potapov, A. ; Habel, A. ; Meyer, J. ; Lichter, P. ; Jones, D. ; von Deimling, A. ; Pfister, S. ; Kool, M. (Last author)
DNA-methylation profiling is a method of choice for molecular verification of pediatric WNT activated medulloblastomas.
Neuro-Oncology 21(2), 214-221 (2019) [10.1093/neuonc/noy155]2019 BibTeX | EndNote: XML, Text | RIS

Wick, W. (First author) ; Dettmer, S. ; Berberich, A. ; Kessler, T. ; Karapanagiotou-Schenkel, I. ; Wick, A. ; Winkler, F. ; Pfaff, E. ; Brors, B. ; Debus, J. ; Unterberg, A. ; Bendszus, M. ; Herold-Mende, C. ; Eisenmenger, A. ; von Deimling, A. ; Jones, D. ; Pfister, S. ; Sahm, F. ; Platten, M. (Last author)
N2M2 (NOA20) phase I/II trial of molecularly matched targeted therapies plus radiotherapy in patients with newly diagnosed non-MGMT hypermethylated glioblastoma.
Neuro-Oncology 21(1), 95-105 (2019) [10.1093/neuonc/noy161]2019 BibTeX | EndNote: XML, Text | RIS

Tegeder, I. ; Thiel, K. ; Erkek, S. ; Johann, P. ; Berlandi, J. ; Thatikonda, V. ; Frühwald, M. C. ; Kool, M. ; Jeibmann, A. ; Hasselblatt, M.
Functional relevance of genes predicted to be affected by epigenetic alterations in atypical teratoid/rhabdoid tumors.
Journal of neuro-oncology 141(1), 43-55 (2019) [10.1007/s11060-018-03018-6]2019 BibTeX | EndNote: XML, Text | RIS

Uro-Coste, E. ; Masliah-Planchon, J. ; Siegfried, A. ; Blanluet, M. ; Lambo, S. ; Kool, M. ; Roujeau, T. ; Boetto, S. ; Palenzuela, G. ; Bertozzi, A.-I. ; Gambart, M. ; Coupier, I. ; Oliver-Petit, I. ; Golmard, L. ; Julia, S. ; Savagner, F. ; Mohand-Oumoussa, B. ; Tauziede-Espariat, A. ; Delisle, M.-B. ; Figarella-Branger, D. ; Bourdeaut, F. ; Rigau, V.
ETMR-like infantile cerebellar embryonal tumors in the extended morphologic spectrum of DICER1-related tumors.
Acta neuropathologica 137(1), 175-177 (2019) [10.1007/s00401-018-1935-7]2019 BibTeX | EndNote: XML, Text | RIS

Dietz, S. (First author) ; Lifshitz, A. ; Kazdal, D. ; Harms, A. ; Endris, V. ; Winter, H. ; Stenzinger, A. ; Warth, A. ; Sill, M. ; Tanay, A. ; Sültmann, H. (Last author)
Global DNA methylation reflects spatial heterogeneity and molecular evolution of lung adenocarcinomas.
International journal of cancer 144(5), 1061 - 1072 (2019) [10.1002/ijc.31939]2019 BibTeX | EndNote: XML, Text | RIS

Erkek, S. (First author) ; Johann, P. (First author) ; Finetti, M. A. ; Drosos, Y. ; Chou, H.-C. ; Zapatka, M. ; Sturm, D. ; Jones, D. ; Korshunov, A. ; Rhyzova, M. ; Wolf, S. ; Mallm, J.-P. ; Beck, K. ; Witt, O. ; Kulozik, A. E. ; Frühwald, M. C. ; Northcott, P. A. ; Korbel, J. O. ; Lichter, P. ; Eils, R. ; Gajjar, A. ; Roberts, C. W. M. ; Williamson, D. ; Hasselblatt, M. ; Chavez, L. (Last author) ; Pfister, S. (Last author) ; Kool, M. (Last author)
Comprehensive Analysis of Chromatin States in Atypical Teratoid/Rhabdoid Tumor Identifies Diverging Roles for SWI/SNF and Polycomb in Gene Regulation.
Cancer cell 35(1), 95 - 110.e8 (2019) [10.1016/j.ccell.2018.11.014]2019 pmc Fulltext by Pubmed Central BibTeX | EndNote: XML, Text | RIS

Lee, C. ; Rudneva, V. A. ; Erkek, S. ; Zapatka, M. ; Chau, L. Q. ; Tacheva-Grigorova, S. K. ; Garancher, A. ; Rusert, J. M. ; Aksoy, O. ; Lea, R. ; Mohammad, H. P. ; Wang, J. ; Weiss, W. A. ; Grimes, H. L. ; Pfister, S. M. ; Northcott, P. A. ; Wechsler-Reya, R. J.
Lsd1 as a therapeutic target in Gfi1-activated medulloblastoma.
Nature Communications 10(1), 332 (2019) [10.1038/s41467-018-08269-5]2019 DBCoverage Fulltext by Pubmed Central BibTeX | EndNote: XML, Text | RIS

Robson, J. P. ; Remke, M. ; Kool, M. ; Julian, E. ; Korshunov, A. ; Pfister, S. ; Osborne, G. W. ; Taylor, M. D. ; Wainwright, B. ; Reynolds, B. A.
Identification of CD24 as a marker of Patched1 deleted medulloblastoma-initiating neural progenitor cells.l401
PLOS ONE 14(1), e0210665 - (2019) [10.1371/journal.pone.0210665]2019 DBCoverage Fulltext by Pubmed Central BibTeX | EndNote: XML, Text | RIS

Okonechnikov, K. (First author) ; Erkek, S. ; Korbel, J. O. ; Pfister, S. ; Chavez, L.
InTAD: chromosome conformation guided analysis of enhancer target genes.
BMC bioinformatics 20(1), 60 (2019) [10.1186/s12859-019-2655-2]2019 DBCoverage Fulltext by Pubmed Central BibTeX | EndNote: XML, Text | RIS

Jaunmuktane, Z. ; Capper, D. ; Jones, D. ; Schrimpf, D. ; Sill, M. ; Dutt, M. ; Suraweera, N. ; Pfister, S. ; von Deimling, A. ; Brandner, S.
Methylation array profiling of adult brain tumours: diagnostic outcomes in a large, single centre.
Acta Neuropathologica Communications 7(1), 24 (2019) [10.1186/s40478-019-0668-8]2019 DBCoverage Fulltext by Pubmed Central BibTeX | EndNote: XML, Text | RIS

Korshunov, A. (First author) ; Casalini, B. ; Chavez, L. ; Hielscher, T. ; Sill, M. ; Ryzhova, M. ; Sharma, T. ; Schrimpf, D. ; Stichel, D. ; Capper, D. ; Reuss, D. E. ; Sturm, D. ; Absalyamova, O. ; Golanov, A. ; Lambo, S. ; Bewerunge-Hudler, M. ; Lichter, P. ; Herold-Mende, C. ; Wick, W. ; Pfister, S. ; Kool, M. ; Jones, D. ; von Deimling, A. ; Sahm, F. (Last author)
Integrated molecular characterization of IDH-mutant glioblastomas.
Neuropathology & applied neurobiology 45(2), 108 - 118 (2019) [10.1111/nan.12523]2019 BibTeX | EndNote: XML, Text | RIS

Zhang, H. ; Klareskog, L. ; Matussek, A. ; Pfister, S. ; Benson, M.
Translating genomic medicine to the clinic: challenges and opportunities.
Genome medicine 11(1), 9 (2019) [10.1186/s13073-019-0622-1]2019 DBCoverage Fulltext by Pubmed Central BibTeX | EndNote: XML, Text | RIS

Lee, J. C. ; Villanueva-Meyer, J. E. ; Ferris, S. P. ; Sloan, E. A. ; Hofmann, J. W. ; Hattab, E. M. ; Williams, B. J. ; Guo, H. ; Torkildson, J. ; Florez, A. ; Van Ziffle, J. ; Onodera, C. ; Grenert, J. P. ; Cho, S.-J. ; Horvai, A. E. ; Jones, D. ; Pfister, S. ; Koelsche, C. ; von Deimling, A. ; Korshunov, A. ; Perry, A. ; Solomon, D. A.
Primary intracranial sarcomas with DICER1 mutation often contain prominent eosinophilic cytoplasmic globules and can occur in the setting of neurofibromatosis type 1.
Acta neuropathologica 137(3), 521 - 525 (2019) [10.1007/s00401-019-01960-x]2019 pmc Fulltext by Pubmed Central BibTeX | EndNote: XML, Text | RIS

Buhl, J. L. (First author) ; Selt, F. ; Hielscher, T. ; Guiho, R. ; Ecker, J. ; Sahm, F. ; Ridinger, J. ; Riehl, D. ; Usta, D. ; Ismer, B. ; Sommerkamp, A. C. ; Martinez-Barbera, J. P. ; Wefers, A. K. ; Remke, M. ; Picard, D. ; Pusch, S. ; Gronych, J. ; Oehme, I. ; van Tilburg, C. M. ; Kool, M. ; Kuhn, D. ; Capper, D. ; von Deimling, A. ; Schuhmann, M. U. ; Herold-Mende, C. ; Korshunov, A. ; Brummer, T. ; Pfister, S. ; Jones, D. ; Witt, O. ; Milde, T. (Last author)
The Senescence-associated Secretory Phenotype Mediates Oncogene-induced Senescence in Pediatric Pilocytic Astrocytoma.
Clinical cancer research 25(6), 1851 - 1866 (2019) [10.1158/1078-0432.CCR-18-1965]2019 BibTeX | EndNote: XML, Text | RIS

Hübner, J.-M. (First author) ; Müller, T. ; Papageorgiou, D. N. ; Mauermann, M. ; Krijgsveld, J. ; Russell, R. B. ; Ellison, D. W. ; Pfister, S. ; Pajtler, K. ; Kool, M. (Last author)
EZHIP / CXorf67 mimics K27M mutated oncohistones and functions as an intrinsic inhibitor of PRC2 function in aggressive posterior fossa ependymoma.
Neuro-Oncology 21(7), 878-889 (2019) [10.1093/neuonc/noz058]2019 BibTeX | EndNote: XML, Text | RIS

El-Ayadi, M. ; Ansari, M. ; Kühnöl, C. D. ; Bendel, A. ; Sturm, D. ; Pietsch, T. ; Kramm, C. M. ; von Bueren, A. O.
Occurrence of high-grade glioma in Noonan syndrome: Report of two cases.
Pediatric blood & cancer 66(5), e27625 (2019) [10.1002/pbc.27625]2019 BibTeX | EndNote: XML, Text | RIS

Hellwig, M. ; Lauffer, M. C. ; Bockmayr, M. ; Spohn, M. ; Merk, D. J. ; Harrison, L. ; Ahlfeld, J. ; Kitowski, A. ; Neumann, J. E. ; Ohli, J. ; Holdhof, D. ; Niesen, J. ; Schoof, M. ; Kool, M. ; Kraus, C. ; Zweier, C. ; Holmberg, D. ; Schüller, U.
TCF4 (E2-2) harbors tumor suppressive functions in SHH medulloblastoma.
Acta neuropathologica 137(4), 657 - 673 (2019) [10.1007/s00401-019-01982-5]2019 BibTeX | EndNote: XML, Text | RIS

Römer, T. ; Temming, P. ; Lohmann, D. R. ; Sturm, D. ; von Deimling, A. ; Sellhaus, B. ; Mull, M. ; Kontny, U. ; Moser, O.
Ectopic intracranial retinoblastoma in a 3.5-month-old infant without eye involvement and without evidence of heritability.
Pediatric blood & cancer 66(5), e27599 (2019) [10.1002/pbc.27599]2019 BibTeX | EndNote: XML, Text | RIS

Ellison, D. W. ; Hawkins, C. ; Jones, D. ; Onar-Thomas, A. ; Pfister, S. ; Reifenberger, G. ; Louis, D. N.
cIMPACT-NOW update 4: diffuse gliomas characterized by MYB, MYBL1, or FGFR1 alterations or BRAFV600E mutation
Acta neuropathologica 137(4), 683 - 687 (2019) [10.1007/s00401-019-01987-0]2019 BibTeX | EndNote: XML, Text | RIS

Körber, V. (First author) ; Yang, J. ; Barah, P. ; Wu, Y. ; Stichel, D. ; Gu, Z. ; Fletcher, M. ; Jones, D. ; Hentschel, B. ; Lamszus, K. ; Tonn, J. C. ; Schackert, G. ; Sabel, M. ; Felsberg, J. ; Zacher, A. ; Kaulich, K. ; Hübschmann, D. ; Herold-Mende, C. ; von Deimling, A. ; Weller, M. ; Radlwimmer, B. ; Schlesner, M. ; Reifenberger, G. ; Höfer, T. ; Lichter, P. (Last author)
Evolutionary Trajectories of IDHWT Glioblastomas Reveal a Common Path of Early Tumorigenesis Instigated Years ahead of Initial Diagnosis.
Cancer cell 35(4), 692-704 (2019) [10.1016/j.ccell.2019.02.007]2019 BibTeX | EndNote: XML, Text | RIS

Koelsche, C. ; Kriegsmann, M. ; Kommoss, F. K. F. ; Stichel, D. ; Kriegsmann, K. ; Vokuhl, C. ; Grünewald, T. G. P. ; Romero-Pérez, L. ; Kirchner, T. ; de Alava, E. ; Diaz-Martin, J. ; Hartmann, W. ; Baumhoer, D. ; Antonescu, C. R. ; Szuhai, K. ; Flucke, U. ; Dirksen, U. ; Pfister, S. ; Jones, D. ; Mechtersheimer, G. ; von Deimling, A. (Last author)
DNA methylation profiling distinguishes Ewing-like sarcoma with EWSR1-NFATc2 fusion from Ewing sarcoma.
Journal of cancer research and clinical oncology 145(5), 1273-1281 (2019) [10.1007/s00432-019-02895-2]2019 BibTeX | EndNote: XML, Text | RIS

Johann, P. (First author) ; Dabek, M. T. ; Heinzmann, T. ; Westhoff, J. ; Kulozik, A. ; Kunz, J.
Excessive Toxicity After Treatment of Congenital Acute Myeloid Leukemia.
Klinische Pädiatrie 231(6), 291-293 (2019) [10.1055/a-0859-7375]2019 BibTeX | EndNote: XML, Text | RIS

Tao, R. ; Murad, N. ; Xu, Z. ; Zhang, P. ; Okonechnikov, K. ; Kool, M. ; Rivero-Hinojosa, S. ; Lazarski, C. ; Zheng, P. ; Liu, Y. ; Eberhart, C. G. ; Rood, B. R. ; Packer, R. ; Pei, Y.
MYC drives Group 3 medulloblastoma through transformation of Sox2+ astrocyte progenitor cells.
Cancer research 79(8), 1967-1980 (2019) [10.1158/0008-5472.CAN-18-1787]2019 BibTeX | EndNote: XML, Text | RIS

Northcott, P. A. ; Robinson, G. W. ; Kratz, C. P. ; Mabbott, D. J. ; Pomeroy, S. L. ; Clifford, S. C. ; Rutkowski, S. ; Ellison, D. W. ; Malkin, D. ; Taylor, M. D. ; Gajjar, A. ; Pfister, S. (Last author)
Medulloblastoma.
Nature reviews / Disease Primers Disease Primers [...] 5(1), 11 (2019) [10.1038/s41572-019-0063-6]2019 BibTeX | EndNote: XML, Text | RIS

Benesch, M. ; Mynarek, M. ; Witt, H. ; Warmuth-Metz, M. ; Pietsch, T. ; Bison, B. ; Pfister, S. ; Pajtler, K. ; Kool, M. ; Schüller, U. ; Pietschmann, K. ; Juhnke, B.-O. ; Tippelt, S. ; Fleischhack, G. ; Schmid, I. ; Kramm, C. M. ; Vorwerk, P. ; Beilken, A. ; Classen, C. F. ; Hernáiz Driever, P. ; Kropshofer, G. ; Imschweiler, T. ; Lemmer, A. ; Kortmann, R.-D. ; Rutkowski, S. ; von Hoff, K.
Newly Diagnosed Metastatic Intracranial Ependymoma in Children: Frequency, Molecular Characteristics, Treatment, and Outcome in the Prospective HIT Series.
The oncologist 24(9), E921-E929 (2019) [10.1634/theoncologist.2018-0489]2019 BibTeX | EndNote: XML, Text | RIS

Korshunov, A. (First author) ; Sahm, F. ; Okonechnikov, K. ; Ryzhova, M. ; Stichel, D. ; Schrimpf, D. ; Casalini, B. ; Sievers, P. ; Meyer, J. ; Zheludkova, O. ; Golanov, A. ; Lichter, P. ; Jones, D. ; Pfister, S. ; Kool, M. ; von Deimling, A. (Last author)
Desmoplastic/nodular medulloblastomas (DNMB) and medulloblastomas with extensive nodularity (MBEN) disclose similar epigenetic signatures but different transcriptional profiles.
Acta neuropathologica 137(6), 1003-1015 (2019) [10.1007/s00401-019-01981-6]2019 BibTeX | EndNote: XML, Text | RIS

Koelsche, C. ; Stichel, D. (First author) ; Griewank, K. G. ; Schrimpf, D. ; Reuss, D. E. ; Bewerunge-Hudler, M. ; Vokuhl, C. ; Dinjens, W. N. M. ; Petersen, I. ; Mittelbronn, M. ; Cuevas-Bourdier, A. ; Buslei, R. ; Pfister, S. ; Flucke, U. ; Mechtersheimer, G. ; Mentzel, T. ; von Deimling, A. (Last author)
Genome-wide methylation profiling and copy number analysis in atypical fibroxanthomas and pleomorphic dermal sarcomas indicate a similar molecular phenotype.
Clinical Sarcoma Research 9(1), 2 (2019) [10.1186/s13569-019-0113-6]2019 DBCoverage Fulltext by Pubmed Central BibTeX | EndNote: XML, Text | RIS

Pagès, M. ; Pajtler, K. ; Puget, S. ; Castel, D. ; Boddaert, N. ; Tauziède?Espariat, A. ; Picot, S. ; Debily, M. ; Kool, M. ; Capper, D. ; Sainte?Rose, C. ; Chrétien, F. ; Pfister, S. ; Pietsch, T. ; Grill, J. ; Varlet, P. ; Andreiuolo, F.
Diagnostics of pediatric supratentorial RELA ependymomas: integration of information from histopathology, genetics, DNA methylation and imaging
Brain pathology 29(3), 325 - 335 (2019) [10.1111/bpa.12664]2019 BibTeX | EndNote: XML, Text | RIS

Sharma, T. (First author) ; Schwalbe, E. C. ; Williamson, D. ; Sill, M. ; Hovestadt, V. ; Mynarek, M. ; Rutkowski, S. ; Robinson, G. W. ; Gajjar, A. ; Cavalli, F. ; Ramaswamy, V. ; Taylor, M. D. ; Lindsey, J. C. ; Hill, R. M. ; Jäger, N. ; Korshunov, A. ; Hicks, D. ; Bailey, S. ; Kool, M. ; Chavez, L. ; Northcott, P. A. ; Pfister, S. (Last author) ; Clifford, S. C.
Second-generation molecular subgrouping of medulloblastoma: an international meta-analysis of Group 3 and Group 4 subtypes.
Acta neuropathologica 138(2), 309-326 (2019) [10.1007/s00401-019-02020-0]2019 BibTeX | EndNote: XML, Text | RIS

Hou, Y. ; Pinheiro, J. ; Sahm, F. ; Reuss, D. E. ; Schrimpf, D. ; Stichel, D. ; Casalini, B. ; Koelsche, C. ; Sievers, P. ; Wefers, A. K. ; Reinhardt, A. ; Ebrahimi, A. ; Fernández-Klett, F. ; Pusch, S. ; Meier, J. ; Schweizer, L. ; Paulus, W. ; Prinz, M. ; Hartmann, C. ; Plate, K. H. ; Reifenberger, G. ; Pietsch, T. ; Varlet, P. ; Pagès, M. ; Schüller, U. ; Scheie, D. ; de Stricker, K. ; Frank, S. ; Hench, J. ; Pollo, B. ; Brandner, S. ; Unterberg, A. ; Pfister, S. M. ; Jones, D. T. W. ; Korshunov, A. ; Wick, W. ; Capper, D. ; Blümcke, I. ; von Deimling, A. (Last author) ; Bertero, L.
Papillary glioneuronal tumor (PGNT) exhibits a characteristic methylation profile and fusions involving PRKCA.
Acta neuropathologica 137(5), 837 - 846 (2019) [10.1007/s00401-019-01969-2]2019 BibTeX | EndNote: XML, Text | RIS

Thomas, C. ; Knerlich-Lukoschus, F. ; Reinhard, H. ; Johann, P. D. ; Sturm, D. ; Sahm, F. ; Bens, S. ; Vogt, J. ; Nemes, K. ; Oyen, F. ; Kordes, U. ; Siebert, R. ; Schneppenheim, R. ; Messing-Jünger, M. ; Pietsch, T. ; von Deimling, A. ; Paulus, W. ; Pfister, S. M. ; Kool, M. ; Frühwald, M. C. ; Hasselblatt, M.
Two molecularly distinct atypical teratoid/rhabdoid tumors (or tumor components) occurring in an infant with rhabdoid tumor predisposition syndrome 1.
Acta neuropathologica 137(5), 847 - 850 (2019) [10.1007/s00401-019-02001-3]2019 BibTeX | EndNote: XML, Text | RIS

Paramasivam, N. (First author) ; Hübschmann, D. (First author) ; Toprak, U. H. ; Ishaque, N. ; Neidert, M. ; Schrimpf, D. ; Stichel, D. ; Reuss, D. ; Sievers, P. ; Reinhardt, A. ; Wefers, A. K. ; Jones, D. T. W. ; Gu, Z. ; Werner, J. ; Uhrig, S. ; Wirsching, H.-G. ; Schick, M. ; Bewerunge-Hudler, M. ; Beck, K. ; Brehmer, S. ; Urbschat, S. ; Seiz-Rosenhagen, M. ; Hänggi, D. ; Herold-Mende, C. ; Ketter, R. ; Eils, R. ; Ram, Z. ; Pfister, S. M. ; Wick, W. ; Weller, M. ; Grossmann, R. ; von Deimling, A. ; Schlesner, M. (Last author) ; Sahm, F. (Last author)
Mutational patterns and regulatory networks in epigenetic subgroups of meningioma.
Acta neuropathologica 138(2), 295-308 (2019) [10.1007/s00401-019-02008-w]2019 BibTeX | EndNote: XML, Text | RIS

Wirthschaft, P. (First author) ; Bode, J. ; Soni, H. ; Dietrich, F. ; Krüwel, T. ; Fischer, B. ; Knobbe-Thomsen, C. B. ; Rossetti, G. ; Hentschel, A. ; Mack, N. ; Schönig, K. ; Breckwoldt, M. O. ; Schmandke, A. ; Pusch, S. ; Medenbach, J. ; Bendszus, M. ; Schwab, M. E. ; von Deimling, A. ; Kool, M. ; Herold-Mende, C. ; Reifenberger, G. ; Ahrends, R. ; Tews, B. (Last author)
RhoA regulates translation of the Nogo-A decoy SPARC in white matter-invading glioblastomas.
Acta neuropathologica 138(2), 275-293 (2019) [10.1007/s00401-019-02021-z]2019 BibTeX | EndNote: XML, Text | RIS

Korshunov, A. (First author) ; Okonechnikov, K. ; Sahm, F. ; Ryzhova, M. ; Stichel, D. ; Sievers, P. ; Meyer, J. ; Schrimpf, D. ; Zheludkova, O. ; Golanov, A. ; Lichter, P. ; Jones, D. T. W. ; Pfister, S. M. ; von Deimling, A. ; Kool, M. (Last author)
Molecular progression of SHH-activated medulloblastomas.
Acta neuropathologica 138(2), 327-330 (2019) [10.1007/s00401-019-02022-y]2019 BibTeX | EndNote: XML, Text | RIS

Binder, H. ; Willscher, E. ; Loeffler-Wirth, H. ; Hopp, L. ; Jones, D. T. W. ; Pfister, S. M. ; Kreuz, M. ; Gramatzki, D. ; Fortenbacher, E. ; Hentschel, B. ; Tatagiba, M. ; Herrlinger, U. ; Vatter, H. ; Matschke, J. ; Westphal, M. ; Krex, D. ; Schackert, G. ; Tonn, J. C. ; Schlegel, U. ; Steiger, H.-J. ; Wick, W. ; Weber, R. G. ; Weller, M. ; Loeffler, M.
DNA methylation, transcriptome and genetic copy number signatures of diffuse cerebral WHO grade II/III gliomas resolve cancer heterogeneity and development.
Acta Neuropathologica Communications 7(1), 59 (2019) [10.1186/s40478-019-0704-8]2019 DBCoverage Fulltext by Pubmed Central BibTeX | EndNote: XML, Text | RIS

Pfaff, E. (First author) ; El Damaty, A. ; Balasubramanian, G. P. ; Blattner-Johnson, M. ; Worst, B. C. ; Stark, S. ; Witt, H. ; Pajtler, K. W. ; van Tilburg, C. M. ; Witt, R. ; Milde, T. ; Jakobs, M. ; Fiesel, P. ; Frühwald, M. C. ; Hernáiz Driever, P. ; Thomale, U. W. ; Schuhmann, M. U. ; Metzler, M. ; Bochennek, K. ; Simon, T. ; Dürken, M. ; Karremann, M. ; Knirsch, S. ; Ebinger, M. ; von Bueren, A. O. ; Pietsch, T. ; Herold-Mende, C. ; Reuss, D. E. ; Kiening, K. ; Lichter, P. ; Eggert, A. ; Kramm, C. M. ; Pfister, S. M. ; Jones, D. T. W. ; Bächli, H. ; Witt, O. (Last author)
Brainstem biopsy in pediatric diffuse intrinsic pontine glioma in the era of precision medicine: the INFORM study experience.
European journal of cancer 114, 27 - 35 (2019) [10.1016/j.ejca.2019.03.019]2019 BibTeX | EndNote: XML, Text | RIS

Schramm, K. (First author) ; Iskar, M. ; Statz, B. ; Jäger, N. ; Haag, D. ; S?abicki, M. ; Pfister, S. M. ; Zapatka, M. ; Gronych, J. ; Jones, D. T. W. (Last author) ; Lichter, P. (Last author)
DECIPHER pooled shRNA library screen identifies PP2A and FGFR signaling as potential therapeutic targets for DIPGs.
Neuro-Oncology 21(7), 867-877 (2019) [10.1093/neuonc/noz057]2019 BibTeX | EndNote: XML, Text | RIS

Fangusaro, J. ; Onar-Thomas, A. ; Young Poussaint, T. ; Wu, S. ; Ligon, A. H. ; Lindeman, N. ; Banerjee, A. ; Packer, R. J. ; Kilburn, L. B. ; Goldman, S. ; Pollack, I. F. ; Qaddoumi, I. ; Jakacki, R. I. ; Fisher, P. G. ; Dhall, G. ; Baxter, P. ; Kreissman, S. G. ; Stewart, C. F. ; Jones, D. T. W. ; Pfister, S. M. ; Vezina, G. ; Stern, J. S. ; Panigrahy, A. ; Patay, Z. ; Tamrazi, B. ; Jones, J. Y. ; Haque, S. S. ; Enterline, D. S. ; Cha, S. ; Fisher, M. J. ; Doyle, L. A. ; Smith, M. ; Dunkel, I. J. ; Fouladi, M.
Selumetinib in paediatric patients with BRAF-aberrant or neurofibromatosis type 1-associated recurrent, refractory, or progressive low-grade glioma: a multicentre, phase 2 trial.
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Feuerbach, L. (First author) ; Sieverling, L. ; Deeg, K. I. ; Ginsbach, P. ; Hutter, B. ; Buchhalter, I. ; Northcott, P. A. ; Mughal, S. S. ; Chudasama, P. ; Glimm, H. ; Scholl, C. ; Lichter, P. ; Fröhling, S. ; Pfister, S. M. ; Jones, D. T. W. ; Rippe, K. ; Brors, B. (Last author)
TelomereHunter - in silico estimation of telomere content and composition from cancer genomes.
BMC bioinformatics 20(1), 272 (2019) [10.1186/s12859-019-2851-0]2019 DBCoverage BibTeX | EndNote: XML, Text | RIS

Ward Gahlawat, A. ; Lenhardt, J. ; Witte, T. ; Keitel, D. ; Kaufhold, A. ; Maass, K. K. ; Pajtler, K. W. ; Sohn, C. ; Schott, S.
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Bandopadhayay, P. ; Piccioni, F. ; O'Rourke, R. ; et al
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Nature Communications 10(1), 2400 (2019) [10.1038/s41467-019-10307-9]2019 DBCoverage BibTeX | EndNote: XML, Text | RIS

Huang, M. ; Tailor, J. ; Zhen, Q. ; Gillmor, A. H. ; Miller, M. L. ; Weishaupt, H. ; Chen, J. ; Zheng, T. ; Nash, E. K. ; McHenry, L. K. ; An, Z. ; Ye, F. ; Takashima, Y. ; Clarke, J. ; Ayetey, H. ; Cavalli, F. M. G. ; Luu, B. ; Moriarity, B. S. ; Ilkhanizadeh, S. ; Chavez, L. ; Yu, C. ; Kurian, K. M. ; Magnaldo, T. ; Sevenet, N. ; Koch, P. ; Pollard, S. M. ; Dirks, P. ; Snyder, M. P. ; Largaespada, D. A. ; Cho, Y. J. ; Phillips, J. J. ; Swartling, F. J. ; Morrissy, A. S. ; Kool, M. ; Pfister, S. M. ; Taylor, M. D. ; Smith, A. ; Weiss, W. A.
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Park, A. K. ; Lee, J. Y. ; Cheong, H. ; Ramaswamy, V. ; Park, S.-H. ; Kool, M. ; Phi, J. H. ; Choi, S. A. ; Cavalli, F. ; Taylor, M. D. ; Kim, S.-K.
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Sievers, P. (First author) ; Appay, R. ; Schrimpf, D. ; Stichel, D. ; Reuss, D. E. ; Wefers, A. K. ; Reinhardt, A. ; Coras, R. ; Ruf, V. C. ; Schmid, S. ; de Stricker, K. ; Boldt, H. B. ; Kristensen, B. W. ; Petersen, J. K. ; Ulhøi, B. P. ; Gardberg, M. ; Aronica, E. ; Hasselblatt, M. ; Brück, W. ; Bielle, F. ; Mokhtari, K. ; Lhermitte, B. ; Wick, W. ; Herold-Mende, C. ; Hänggi, D. ; Brandner, S. ; Giangaspero, F. ; Capper, D. ; Rushing, E. ; Wesseling, P. ; Pfister, S. M. ; Figarella-Branger, D. ; von Deimling, A. ; Sahm, F. ; Jones, D. (Last author)
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Stichel, D. (First author) ; Schrimpf, D. ; Casalini, B. ; Meyer, J. ; Wefers, A. K. ; Sievers, P. ; Korshunov, A. ; Koelsche, C. ; Reuss, D. E. ; Reinhardt, A. ; Ebrahimi, A. ; Fernández-Klett, F. ; Kessler, T. ; Sturm, D. ; Ecker, J. ; Milde, T. ; Herold-Mende, C. ; Witt, O. ; Pfister, S. M. ; Wick, W. ; Jones, D. T. W. ; von Deimling, A. (Last author) ; Sahm, F. (Last author)
Routine RNA sequencing of formalin-fixed paraffin-embedded specimens in neuropathology diagnostics identifies diagnostically and therapeutically relevant gene fusions.
Acta neuropathologica 138(5), 827-835 (2019) [10.1007/s00401-019-02039-3]2019 BibTeX | EndNote: XML, Text | RIS

Jones, D. (First author) ; Banito, A. ; Grünewald, T. G. P. ; Haber, M. ; Jäger, N. ; Kool, M. ; Milde, T. ; Molenaar, J. J. ; Nabbi, A. ; Pugh, T. J. ; Schleiermacher, G. ; Smith, M. A. ; Westermann, F. ; Pfister, S. (Last author)
Molecular characteristics and therapeutic vulnerabilities across paediatric solid tumours.
Nature reviews / Cancer Cancer [...] 19(8), 420 - 438 (2019) [10.1038/s41568-019-0169-x]2019 BibTeX | EndNote: XML, Text | RIS

Hovestadt, V. ; Smith, K. S. ; Bihannic, L. ; et al
Resolving medulloblastoma cellular architecture by single-cell genomics.
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Lou, E. ; Nelson, A. C. ; Kool, M. (Last author)
Differential response of SHH-expressing adult medulloblastomas to the sonic hedgehog inhibitor vismodegib: whole-genome analysis.
Cancer biology & therapy 20(11), 1398-1402 (2019) [10.1080/15384047.2019.1647057]2019 BibTeX | EndNote: XML, Text | RIS

Johann, P. (First author) ; Jäger, N. ; Pfister, S. M. ; Sill, M. (Last author)
RF_Purify: a novel tool for comprehensive analysis of tumor-purity in methylation array data based on random forest regression.
BMC bioinformatics 20(1), 428 (2019) [10.1186/s12859-019-3014-z]2019 DBCoverage Fulltext by Pubmed Central BibTeX | EndNote: XML, Text | RIS

Ghasemi, D. R. (First author) ; Sill, M. ; Okonechnikov, K. ; Korshunov, A. ; Yip, S. ; Schutz, P. W. ; Scheie, D. ; Kruse, A. ; Harter, P. N. ; Kastelan, M. ; Wagner, M. ; Hartmann, C. ; Benzel, J. ; Maass, K. K. ; Khasraw, M. ; Sträter, R. ; Thomas, C. ; Paulus, W. ; Kratz, C. P. ; Witt, H. ; Kawauchi, D. ; Herold-Mende, C. ; Sahm, F. ; Brandner, S. ; Kool, M. ; Jones, D. T. W. ; von Deimling, A. ; Pfister, S. M. ; Reuss, D. E. (Last author) ; Pajtler, K. (Last author)
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Pienkowska, M. ; Choufani, S. ; Turinsky, A. L. ; Guha, T. ; Merino, D. M. ; Novokmet, A. ; Brudno, M. ; Weksberg, R. ; Shlien, A. ; Hawkins, C. ; Bouffet, E. ; Tabori, U. ; Gilbertson, R. ; Finlay, J. L. ; Jabado, N. ; Thomas, C. ; Sill, M. ; Capper, D. ; Hasselblatt, M. ; Malkin, D.
DNA methylation signature is prognostic of choroid plexus tumor aggressiveness.
Clinical epigenetics 11(1), 117 (2019) [10.1186/s13148-019-0708-z]2019 DBCoverage Fulltext by Pubmed Central BibTeX | EndNote: XML, Text | RIS

Pajtler, K. (First author) ; Wei, Y. ; Okonechnikov, K. (First author) ; Silva, P. B. G. (First author) ; Vouri, M. ; Zhang, L. ; Brabetz, S. ; Sieber, L. ; Gulley, M. ; Mauermann, M. ; Wedig, T. ; Mack, N. ; Imamura Kawasawa, Y. ; Sharma, T. ; Zuckermann, M. ; Andreiuolo, F. ; Holland, E. ; Maass, K. ; Körkel-Qu, H. ; Liu, H.-K. ; Sahm, F. ; Capper, D. ; Bunt, J. ; Richards, L. J. ; Jones, D. T. W. ; Korshunov, A. ; Chavez, L. ; Lichter, P. ; Hoshino, M. ; Pfister, S. ; Kool, M. ; Li, W. ; Kawauchi, D. (Last author)
YAP1 subgroup supratentorial ependymoma requires TEAD and nuclear factor I-mediated transcriptional programmes for tumorigenesis.
Nature Communications 10(1), 3914 (2019) [10.1038/s41467-019-11884-5]2019 DBCoverage Fulltext by Pubmed Central BibTeX | EndNote: XML, Text | RIS

Dutzmann, C. M. ; Vogel, J. ; Kratz, C. P. ; Pajtler, K. W. ; Pfister, S. M. ; Dörgeloh, B. B.
[Update on Li-Fraumeni syndrome].
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Senfter, D. ; Samadaei, M. ; Mader, R. M. ; Gojo, J. ; Peyrl, A. ; Krupitza, G. ; Kool, M. ; Sill, M. ; Haberler, C. ; Ricken, G. ; Czech, T. ; Slavc, I. ; Madlener, S.
High impact of miRNA-4521 on FOXM1 expression in medulloblastoma.
Cell death & disease 10(10), 696 (2019) [10.1038/s41419-019-1926-1]2019 DBCoverage BibTeX | EndNote: XML, Text | RIS

Suzuki, H. ; Kumar, S. A. ; Shuai, S. ; et al
Recurrent non-coding U1-snRNA mutations drive cryptic splicing in Shh medulloblastoma.
Nature <London> 574(7780), 707 - 711 (2019) [10.1038/s41586-019-1650-0]2019 BibTeX | EndNote: XML, Text | RIS

Jaju, A. ; Hwang, E. I. ; Kool, M. ; Capper, D. ; Chavez, L. ; Brabetz, S. ; Billups, C. ; Li, Y. ; Fouladi, M. ; Packer, R. J. ; Pfister, S. M. ; Olson, J. M. ; Heier, L. A.
MRI Features of Histologically Diagnosed Supratentorial Primitive Neuroectodermal Tumors and Pineoblastomas in Correlation with Molecular Diagnoses and Outcomes: A Report from the Children's Oncology Group ACNS0332 Trial.
American journal of neuroradiology 40(11), 1796-1803 (2019) [10.3174/ajnr.A6253]2019 BibTeX | EndNote: XML, Text | RIS

Srivastava, A. (First author) ; Kumar, A. ; Giangiobbe, S. ; Bonora, E. ; Hemminki, K. ; Försti, A. ; Bandapalli, O. R. (Last author)
Whole Genome Sequencing of Familial Non-Medullary Thyroid Cancer Identifies Germline Alterations in MAPK/ERK and PI3K/AKT Signaling Pathways.
Biomolecules 9(10), 605 (2019) [10.3390/biom9100605]2019 DBCoverage BibTeX | EndNote: XML, Text | RIS

Engel, I. ; Seumois, G. ; Chavez, L. ; Samaniego-Castruita, D. ; White, B. ; Chawla, A. ; Mock, D. ; Vijayanand, P. ; Kronenberg, M.
Publisher Correction: Innate-like functions of natural killer T cell subsets result from highly divergent gene programs.
Nature immunology 20(12), 1700 (2019) [10.1038/s41590-019-0532-9]2019 BibTeX | EndNote: XML, Text | RIS

Pienkowska, M. ; Choufani, S. ; Turinsky, A. L. ; Guha, T. ; Merino, D. M. ; Novokmet, A. ; Brudno, M. ; Weksberg, R. ; Shlien, A. ; Hawkins, C. ; Bouffet, E. ; Tabori, U. ; Gilbertson, R. J. ; Finlay, J. L. ; Jabado, N. ; Thomas, C. ; Sill, M. ; Capper, D. ; Hasselblatt, M. ; Malkin, D.
Correction to: DNA methylation signature is prognostic of choroid plexus tumor aggressiveness.
Clinical epigenetics 11(1), 144 (2019) [10.1186/s13148-019-0737-7]2019 DBCoverage Fulltext by Pubmed Central BibTeX | EndNote: XML, Text | RIS

Stock, A. ; Mynarek, M. ; Pietsch, T. ; Pfister, S. M. ; Clifford, S. C. ; Goschzik, T. ; Sturm, D. ; Schwalbe, E. C. ; Hicks, D. ; Rutkowski, S. ; Bison, B. ; Pham, M. ; Warmuth-Metz, M.
Imaging Characteristics of Wingless Pathway Subgroup Medulloblastomas: Results from the German HIT/SIOP-Trial Cohort.
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Chun, H. E. ; Johann, P. D. ; Milne, K. ; Zapatka, M. ; Buellesbach, A. ; Ishaque, N. ; Iskar, M. ; Erkek, S. ; Wei, L. ; Tessier-Cloutier, B. ; Lever, J. ; Titmuss, E. ; Topham, J. T. ; Bowlby, R. ; Chuah, E. ; Mungall, K. L. ; Ma, Y. ; Mungall, A. J. ; Moore, R. A. ; Taylor, M. D. ; Gerhard, D. S. ; Jones, S. J. M. ; Korshunov, A. ; Gessler, M. ; Kerl, K. ; Hasselblatt, M. ; Frühwald, M. C. ; Perlman, E. J. ; Nelson, B. H. ; Pfister, S. M. ; Marra, M. A. ; Kool, M. (Last author)
Identification and Analyses of Extra-Cranial and Cranial Rhabdoid Tumor Molecular Subgroups Reveal Tumors with Cytotoxic T Cell Infiltration.
Cell reports 29(8), 2338-2354.e7 (2019) [10.1016/j.celrep.2019.10.013]2019 DBCoverage BibTeX | EndNote: XML, Text | RIS

Treisman, D. M. ; Li, Y. ; Pierce, B. R. ; Li, C. ; Chervenak, A. P. ; Tomasek, G. J. ; Lozano, G. ; Zheng, X. ; Kool, M. ; Zhu, Y.
Sox2+ cells in Sonic Hedgehog-subtype medulloblastoma resist p53-mediated cell-cycle arrest response and drive therapy-induced recurrence.
Neuro-oncology advances 1(1), vdz027 (2019) [10.1093/noajnl/vdz027]2019 DBCoverage Fulltext by Pubmed Central BibTeX | EndNote: XML, Text | RIS

Aldape, K. ; Brindle, K. M. ; Chesler, L. ; Chopra, R. ; Gajjar, A. ; Gilbert, M. R. ; Gottardo, N. ; Gutmann, D. H. ; Hargrave, D. ; Holland, E. C. ; Jones, D. T. W. ; Joyce, J. A. ; Kearns, P. ; Kieran, M. W. ; Mellinghoff, I. K. ; Merchant, M. ; Pfister, S. M. ; Pollard, S. M. ; Ramaswamy, V. ; Rich, J. N. ; Robinson, G. W. ; Rowitch, D. H. ; Sampson, J. H. ; Taylor, M. D. ; Workman, P. ; Gilbertson, R. J.
Challenges to curing primary brain tumours.
Nature reviews / Clinical oncology Clinical oncology [...] 16(8), 509 - 520 (2019) [10.1038/s41571-019-0177-5]2019 pmc Fulltext by Pubmed Central BibTeX | EndNote: XML, Text | RIS

Aldape, K. ; Brindle, K. M. ; Chesler, L. ; Chopra, R. ; Gajjar, A. ; Gilbert, M. R. ; Gottardo, N. ; Gutmann, D. H. ; Hargrave, D. ; Holland, E. C. ; Jones, D. T. W. ; Joyce, J. A. ; Kearns, P. ; Kieran, M. W. ; Mellinghoff, I. K. ; Merchant, M. ; Pfister, S. M. ; Pollard, S. M. ; Ramaswamy, V. ; Rich, J. N. ; Robinson, G. W. ; Rowitch, D. H. ; Sampson, J. H. ; Taylor, M. D. ; Workman, P. ; Gilbertson, R. J.
Reply to 'Assembling the brain trust: the multidisciplinary imperative in neuro-oncology'.
Nature reviews / Clinical oncology Clinical oncology [...] 16(8), 522 - 523 (2019) [10.1038/s41571-019-0236-y]2019 BibTeX | EndNote: XML, Text | RIS

Kommoss, F. K. F. ; Stichel, D. ; Schrimpf, D. ; Kriegsmann, M. ; Tessier-Cloutier, B. ; Talhouk, A. ; McAlpine, J. N. ; Chang, K. T. E. ; Sturm, D. ; Pfister, S. M. ; Romero-Pérez, L. ; Kirchner, T. ; Grünewald, T. G. P. ; Buslei, R. ; Sinn, H.-P. ; Mechtersheimer, G. ; Schirmacher, P. ; Schmidt, D. ; Lehr, H.-A. ; Sahm, F. ; Huntsman, D. G. ; Gilks, C. B. ; Kommoss, F. ; von Deimling, A. (Last author) ; Koelsche, C.
DNA methylation-based profiling of uterine neoplasms: a novel tool to improve gynecologic cancer diagnostics.213
Journal of cancer research and clinical oncology 146(1), 97-104 (2020) [10.1007/s00432-019-03093-w]2020 BibTeX | EndNote: XML, Text | RIS

Lambo, S. (First author) ; Gröbner, S. ; Rausch, T. ; et al
The molecular landscape of ETMR at diagnosis and relapse.
Nature <London> 576(7786), 274-280 (2019) [10.1038/s41586-019-1815-x]2019 BibTeX | EndNote: XML, Text | RIS

Franceschi, E. ; Hofer, S. ; Brandes, A. A. ; Frappaz, D. ; Kortmann, R.-D. ; Bromberg, J. ; Dangouloff-Ros, V. ; Boddaert, N. ; Hattingen, E. ; Wiestler, B. ; Clifford, S. C. ; Figarella-Branger, D. ; Giangaspero, F. ; Haberler, C. ; Pietsch, T. ; Pajtler, K. W. ; Pfister, S. M. ; Guzman, R. ; Stummer, W. ; Combs, S. E. ; Seidel, C. ; Beier, D. ; McCabe, M. G. ; Grotzer, M. ; Laigle-Donadey, F. ; Stücklin, A. S. G. ; Idbaih, A. ; Preusser, M. ; van den Bent, M. ; Weller, M. ; Hau, P.
EANO-EURACAN clinical practice guideline for diagnosis, treatment, and follow-up of post-pubertal and adult patients with medulloblastoma.
The lancet <London> / Oncology Oncology 20(12), e715 - e728 (2019) [10.1016/S1470-2045(19)30669-2]2019 BibTeX | EndNote: XML, Text | RIS

Okonechnikov, K. (First author) ; Pfister, S. M. ; Kutscher, L. (Last author)
Probing Medulloblastoma Initiation at the Single-Cell Level.
Trends in cancer 5(12), 759 - 761 (2019) [10.1016/j.trecan.2019.10.002]2019 BibTeX | EndNote: XML, Text | RIS

van Tilburg, C. M. (First author) ; Milde, T. (First author) ; Witt, R. ; Ecker, J. ; Hielscher, T. ; Seitz, A. ; Schenk, J.-P. ; Buhl, J. L. ; Riehl, D. ; Frühwald, M. C. ; Pekrun, A. ; Rossig, C. ; Wieland, R. ; Flotho, C. ; Kordes, U. ; Gruhn, B. ; Simon, T. ; Linderkamp, C. ; Sahm, F. ; Taylor, L. ; Freitag, A. ; Burhenne, J. ; Foerster, K. I. ; Meid, A. D. ; Pfister, S. M. ; Karapanagiotou-Schenkel, I. ; Witt, O. (Last author)
Phase I/II intra-patient dose escalation study of vorinostat in children with relapsed solid tumor, lymphoma, or leukemia
Clinical epigenetics 11(1), 188 (2019) [10.1186/s13148-019-0775-1]2019 DBCoverage BibTeX | EndNote: XML, Text | RIS

Pierce, A. M. ; Witt, D. A. ; Donson, A. M. ; Gilani, A. ; Sanford, B. ; Sill, M. ; Van Court, B. ; Oweida, A. ; Prince, E. W. ; Steiner, J. ; Danis, E. ; Dorris, K. ; Hankinson, T. ; Handler, M. H. ; Jones, K. L. ; Karam, S. D. ; Serkova, N. J. ; Vibhakar, R. ; Foreman, N. K. ; Griesinger, A. M.
Establishment of patient-derived orthotopic xenograft model of 1q+ posterior fossa group A ependymoma.
Neuro-Oncology 21(12), 1540 - 1551 (2019) [10.1093/neuonc/noz116]2019 BibTeX | EndNote: XML, Text | RIS

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